Variant report

Variant	rs9382604
Chromosome Location	chr6:56145210-56145211
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:56145135..56147974-chr6:56151778..56154219,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10498810	0.80[ASN][1000 genomes]
rs10948981	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12525967	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12530020	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12665485	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1925158	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1925160	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1925187	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1925188	0.82[ASN][1000 genomes]
rs2328693	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2397210	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2397212	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2397213	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3846927	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3846928	0.80[ASN][1000 genomes]
rs3846929	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3846931	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4119562	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4119563	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4712121	0.80[ASN][1000 genomes]
rs4715602	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4715603	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55734123	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs66796842	0.84[ASN][1000 genomes]
rs67454631	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72645374	0.84[ASN][1000 genomes]
rs7745111	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7759570	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9349807	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9349809	0.81[ASN][1000 genomes]
rs9370495	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9382597	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9382599	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9382601	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9382603	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9396185	0.80[ASN][1000 genomes]
rs994040	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:56143600-56145400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:56143600-56156200	Weak transcription	Fetal Lung	lung
3	chr6:56143800-56156200	Weak transcription	Colon Smooth Muscle	Colon
4	chr6:56144200-56145400	Flanking Active TSS	A549	lung
5	chr6:56145200-56145800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr6:56145200-56145800	Enhancers	Fetal Muscle Leg	muscle

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