Variant report

Variant	rs4714051
Chromosome Location	chr6:37222096-37222097
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11756258	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11758286	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12190959	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12210793	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12210895	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs149709	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs149713	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17572320	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs195760	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs195764	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2010960	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2622893	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9349035	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37213400-37224800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:37213400-37225600	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr6:37214400-37224600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr6:37214400-37224800	Weak transcription	Hela-S3	cervix
5	chr6:37214800-37225200	Weak transcription	Ovary	ovary
6	chr6:37215000-37224600	Weak transcription	Osteobl	bone
7	chr6:37219200-37223800	Weak transcription	K562	blood
8	chr6:37219400-37224600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr6:37219600-37224600	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr6:37219600-37224600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr6:37219600-37224600	Weak transcription	HMEC	breast
12	chr6:37219800-37224800	Weak transcription	HUVEC	blood vessel
13	chr6:37220200-37224600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:37221000-37222200	Enhancers	Fetal Intestine Small	intestine
15	chr6:37221200-37222200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:37221200-37222400	Enhancers	Fetal Intestine Large	intestine
17	chr6:37221600-37224800	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr6:37222000-37222200	Enhancers	Duodenum Mucosa	Duodenum
19	chr6:37222000-37222200	Enhancers	Rectal Mucosa Donor 29	rectum
20	chr6:37222000-37222200	Enhancers	HepG2	liver
21	chr6:37222000-37222400	Flanking Active TSS	Dnd41	blood

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