The 2.0 version of rSNPBase

Variant report

Variant rs4748809
Chromosome Location chr10:22823797-22823798
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22819000-22830000 Weak transcription HUVEC blood vessel
2 chr10:22819400-22827800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr10:22819600-22825000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr10:22819600-22825200 Weak transcription Fetal Muscle Leg muscle
5 chr10:22819800-22824000 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr10:22819800-22825200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr10:22819800-22825400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr10:22819800-22825400 Weak transcription Spleen Spleen
9 chr10:22820000-22824400 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr10:22820000-22826600 Weak transcription Aorta Aorta
11 chr10:22820200-22824000 Weak transcription Primary B cells from cord blood blood
12 chr10:22820200-22826200 Weak transcription A549 lung
13 chr10:22820200-22827800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr10:22820200-22828000 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr10:22820400-22824200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr10:22820400-22825200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr10:22820600-22830000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr10:22820800-22824200 Weak transcription HSMM muscle
19 chr10:22820800-22825400 Weak transcription Muscle Satellite Cultured Cells --
20 chr10:22820800-22828000 Weak transcription HSMMtube muscle
21 chr10:22821000-22823800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr10:22821000-22823800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr10:22821000-22824200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr10:22821000-22825200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr10:22821200-22824000 Weak transcription Primary B cells from peripheral blood blood
26 chr10:22821200-22824200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr10:22821200-22825000 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr10:22821400-22824000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr10:22821400-22825400 Weak transcription H1 Cell Line embryonic stem cell
30 chr10:22821400-22826000 Weak transcription Duodenum Mucosa Duodenum
31 chr10:22821400-22826000 Weak transcription Stomach Smooth Muscle stomach
32 chr10:22821400-22826200 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr10:22821600-22827400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr10:22821800-22825200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr10:22821800-22825200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr10:22821800-22825400 Weak transcription Lung lung
37 chr10:22822000-22825200 Weak transcription Dnd41 blood
38 chr10:22822000-22826200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr10:22822200-22825000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr10:22822200-22826800 Enhancers Brain Substantia Nigra brain
41 chr10:22822200-22834200 Strong transcription Primary T cells from cord blood blood
42 chr10:22822200-22856000 Weak transcription Small Intestine intestine
43 chr10:22822400-22824600 Enhancers Brain Angular Gyrus brain
44 chr10:22822400-22824800 Enhancers Brain Hippocampus Middle brain
45 chr10:22822400-22825000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr10:22822400-22825200 Weak transcription Fetal Stomach stomach
47 chr10:22822400-22825800 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr10:22822400-22826000 Enhancers Brain Inferior Temporal Lobe brain
49 chr10:22822400-22826600 Weak transcription Gastric stomach
50 chr10:22822400-22826800 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015