Variant report

Variant	rs10508646
Chromosome Location	chr10:22751254-22751255
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22717670..22719242-chr10:22749510..22751621,2	K562	blood:
2	chr10:22725325..22727863-chr10:22750975..22754414,4	MCF-7	breast:

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs10159727	1.00[ASN][1000 genomes]
rs10508647	1.00[GIH][hapmap];1.00[ASN][1000 genomes]
rs10734041	1.00[ASN][1000 genomes]
rs10741004	1.00[ASN][1000 genomes]
rs10828309	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs11012998	0.92[EUR][1000 genomes]
rs11013007	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013012	0.89[EUR][1000 genomes]
rs11013013	1.00[ASN][1000 genomes]
rs11013015	1.00[ASN][1000 genomes]
rs11013016	1.00[ASN][1000 genomes]
rs11013026	1.00[ASN][1000 genomes]
rs11593715	1.00[ASN][1000 genomes]
rs11812583	0.92[EUR][1000 genomes]
rs12243038	1.00[CEU][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];0.92[EUR][1000 genomes]
rs12247353	1.00[ASN][1000 genomes]
rs12248190	1.00[CEU][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];0.92[EUR][1000 genomes]
rs12251063	0.81[EUR][1000 genomes]
rs12251462	1.00[CEU][hapmap]
rs12256968	0.92[EUR][1000 genomes]
rs12258371	0.92[EUR][1000 genomes]
rs12258498	1.00[ASN][1000 genomes]
rs12262743	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs12264678	1.00[ASN][1000 genomes]
rs12265492	1.00[CEU][hapmap];1.00[GIH][hapmap];0.85[TSI][hapmap];0.89[EUR][1000 genomes]
rs12781081	1.00[ASN][1000 genomes]
rs1610340	1.00[ASN][1000 genomes]
rs16922359	1.00[ASN][1000 genomes]
rs17415557	1.00[ASN][1000 genomes]
rs1887093	1.00[ASN][1000 genomes]
rs28820979	1.00[ASN][1000 genomes]
rs4748809	1.00[ASN][1000 genomes]
rs55927891	1.00[ASN][1000 genomes]
rs56269206	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56373296	1.00[ASN][1000 genomes]
rs56768929	1.00[ASN][1000 genomes]
rs57036965	1.00[ASN][1000 genomes]
rs57074189	1.00[ASN][1000 genomes]
rs57920220	1.00[ASN][1000 genomes]
rs57965592	1.00[ASN][1000 genomes]
rs58253107	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58402183	1.00[ASN][1000 genomes]
rs58554507	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59759821	1.00[ASN][1000 genomes]
rs60327547	1.00[ASN][1000 genomes]
rs61377954	1.00[ASN][1000 genomes]
rs6482210	1.00[CEU][hapmap]
rs6482211	1.00[ASN][1000 genomes]
rs6482216	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs6482218	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7073403	0.89[EUR][1000 genomes]
rs7078635	1.00[ASN][1000 genomes]
rs7079548	1.00[CEU][hapmap]
rs7084761	1.00[ASN][1000 genomes]
rs72814829	1.00[ASN][1000 genomes]
rs72814833	1.00[ASN][1000 genomes]
rs73598529	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598532	1.00[ASN][1000 genomes]
rs73598533	1.00[ASN][1000 genomes]
rs74123043	1.00[ASN][1000 genomes]
rs74123046	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74123047	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74123049	1.00[ASN][1000 genomes]
rs74123050	1.00[ASN][1000 genomes]
rs74123051	1.00[ASN][1000 genomes]
rs7893537	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs7911096	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs7919655	1.00[ASN][1000 genomes]
rs7921007	0.92[EUR][1000 genomes]
rs7923274	0.89[EUR][1000 genomes]
rs943192	1.00[ASN][1000 genomes]
rs943193	1.00[ASN][1000 genomes]
rs9663298	0.92[EUR][1000 genomes]
rs9787428	1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22743800-22752200	Weak transcription	Brain Hippocampus Middle	brain
2	chr10:22744000-22752400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:22748800-22752000	Weak transcription	GM12878-XiMat	blood
4	chr10:22751200-22752600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:22751200-22752600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr10:22751200-22752800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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