Variant report

Variant	rs74123047
Chromosome Location	chr10:22738919-22738920
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22737046..22739451-chr10:22740492..22742378,3	K562	blood:
2	chr10:22627926..22632058-chr10:22737838..22740841,3	K562	blood:
3	chr10:22738855..22740957-chr10:22839794..22842697,2	MCF-7	breast:
4	chr10:22725102..22726678-chr10:22737694..22740220,2	MCF-7	breast:
5	chr10:22737046..22739451-chr10:22740492..22742345,2	K562	blood:
6	chr10:22727625..22729695-chr10:22737615..22739983,2	MCF-7	breast:
7	chr10:22627926..22632058-chr10:22736197..22740841,5	K562	blood:

Variant related genes	Relation type
ENSG00000272366	Chromatin interaction

Extended variants
information (count: 70 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:70)

rs_ID	r²[population]
rs10159727	1.00[ASN][1000 genomes]
rs10508646	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10508647	1.00[ASN][1000 genomes]
rs10734041	1.00[ASN][1000 genomes]
rs10741004	1.00[ASN][1000 genomes]
rs10828309	0.94[EUR][1000 genomes]
rs11012998	0.97[EUR][1000 genomes]
rs11013007	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013012	0.94[EUR][1000 genomes]
rs11013013	1.00[ASN][1000 genomes]
rs11013015	1.00[ASN][1000 genomes]
rs11013016	1.00[ASN][1000 genomes]
rs11013026	1.00[ASN][1000 genomes]
rs11593715	1.00[ASN][1000 genomes]
rs11812583	0.97[EUR][1000 genomes]
rs12243038	0.97[EUR][1000 genomes]
rs12247353	1.00[ASN][1000 genomes]
rs12248190	0.97[EUR][1000 genomes]
rs12256968	0.97[EUR][1000 genomes]
rs12258371	0.97[EUR][1000 genomes]
rs12258498	1.00[ASN][1000 genomes]
rs12262743	0.97[EUR][1000 genomes]
rs12264678	1.00[ASN][1000 genomes]
rs12265492	0.94[EUR][1000 genomes]
rs12781081	1.00[ASN][1000 genomes]
rs1610340	1.00[ASN][1000 genomes]
rs16922359	1.00[ASN][1000 genomes]
rs17415557	1.00[ASN][1000 genomes]
rs1887093	1.00[ASN][1000 genomes]
rs28820979	1.00[ASN][1000 genomes]
rs4748809	1.00[ASN][1000 genomes]
rs55927891	1.00[ASN][1000 genomes]
rs56269206	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56373296	1.00[ASN][1000 genomes]
rs56768929	1.00[ASN][1000 genomes]
rs57036965	1.00[ASN][1000 genomes]
rs57074189	1.00[ASN][1000 genomes]
rs57920220	1.00[ASN][1000 genomes]
rs57965592	1.00[ASN][1000 genomes]
rs58253107	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58402183	1.00[ASN][1000 genomes]
rs58554507	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59759821	1.00[ASN][1000 genomes]
rs60327547	1.00[ASN][1000 genomes]
rs61377954	1.00[ASN][1000 genomes]
rs6482211	1.00[ASN][1000 genomes]
rs6482216	0.92[EUR][1000 genomes]
rs6482218	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7073403	0.94[EUR][1000 genomes]
rs7078635	1.00[ASN][1000 genomes]
rs7084761	1.00[ASN][1000 genomes]
rs72814829	1.00[ASN][1000 genomes]
rs72814833	1.00[ASN][1000 genomes]
rs73598529	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598532	1.00[ASN][1000 genomes]
rs73598533	1.00[ASN][1000 genomes]
rs74123043	1.00[ASN][1000 genomes]
rs74123046	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74123049	1.00[ASN][1000 genomes]
rs74123050	1.00[ASN][1000 genomes]
rs74123051	1.00[ASN][1000 genomes]
rs7893537	0.97[EUR][1000 genomes]
rs7911096	0.97[EUR][1000 genomes]
rs7919655	1.00[ASN][1000 genomes]
rs7921007	0.97[EUR][1000 genomes]
rs7923274	0.94[EUR][1000 genomes]
rs943192	1.00[ASN][1000 genomes]
rs943193	1.00[ASN][1000 genomes]
rs9663298	0.97[EUR][1000 genomes]
rs9787428	1.00[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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