Variant report

Variant	rs12256968
Chromosome Location	chr10:22731410-22731411
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22729078..22734479-chr10:22734589..22737865,6	K562	blood:
2	chr10:22629327..22630926-chr10:22730148..22731770,2	K562	blood:
3	chr10:22724628..22727475-chr10:22730880..22733467,2	K562	blood:

Variant related genes	Relation type
ENSG00000272366	Chromatin interaction

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10508646	0.92[EUR][1000 genomes]
rs10828309	1.00[CEU][hapmap];0.82[YRI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012998	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013007	0.89[EUR][1000 genomes]
rs11013012	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11812583	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12243038	1.00[CEU][hapmap];0.95[YRI][hapmap];0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12248190	1.00[CEU][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12251462	1.00[CEU][hapmap];0.81[AMR][1000 genomes]
rs12258371	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12262743	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12265492	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56269206	0.97[EUR][1000 genomes]
rs58253107	0.89[EUR][1000 genomes]
rs58554507	0.94[EUR][1000 genomes]
rs6482210	1.00[CEU][hapmap]
rs6482211	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs6482216	1.00[CEU][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6482218	0.92[EUR][1000 genomes]
rs7073403	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7079548	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs7080269	1.00[ASN][1000 genomes]
rs73598518	1.00[ASN][1000 genomes]
rs73598529	0.97[EUR][1000 genomes]
rs74123046	0.97[EUR][1000 genomes]
rs74123047	0.97[EUR][1000 genomes]
rs7893537	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7911096	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7921007	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7923274	0.97[EUR][1000 genomes]
rs9663298	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22727400-22732600	Weak transcription	HSMM	muscle
2	chr10:22727600-22732000	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr10:22727800-22733000	Weak transcription	Osteobl	bone
4	chr10:22728000-22731800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr10:22728000-22732600	Weak transcription	GM12878-XiMat	blood
6	chr10:22728000-22732600	Weak transcription	HSMMtube	muscle
7	chr10:22728000-22733200	Weak transcription	Stomach Mucosa	stomach
8	chr10:22728000-22734200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr10:22728200-22732200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:22728200-22732200	Weak transcription	Primary B cells from peripheral blood	blood
11	chr10:22730000-22732000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr10:22730600-22733000	Enhancers	Placenta Amnion	Placenta Amnion
13	chr10:22731400-22732400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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