Variant report

Variant	rs4748878
Chromosome Location	chr10:23677824-23677825
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10828437	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10828441	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10828450	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs1398025	0.84[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2012456	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs4019731	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4636559	0.89[EUR][1000 genomes]
rs4747469	1.00[CEU][hapmap];0.83[MEX][hapmap];0.92[TSI][hapmap];0.89[EUR][1000 genomes]
rs6482272	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7068798	0.95[EUR][1000 genomes]
rs7076002	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7087405	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7095622	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73602542	0.89[EUR][1000 genomes]
rs7918621	1.00[CEU][hapmap];0.82[CHB][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3414372	chr10:23677617-23677919	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23671000-23679600	Weak transcription	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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