Variant report

Variant	rs73602542
Chromosome Location	chr10:23694376-23694377
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10458698	0.93[ASN][1000 genomes]
rs10828437	0.90[EUR][1000 genomes]
rs10828441	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10828450	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1398025	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4019731	0.90[EUR][1000 genomes]
rs4636559	0.82[EUR][1000 genomes]
rs4747469	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4748878	0.89[EUR][1000 genomes]
rs6482272	0.90[EUR][1000 genomes]
rs7068798	0.89[EUR][1000 genomes]
rs7076002	0.89[EUR][1000 genomes]
rs7087405	0.90[EUR][1000 genomes]
rs7095622	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7918621	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23688800-23694800	Weak transcription	Placenta	Placenta
2	chr10:23689400-23701000	Weak transcription	Osteobl	bone
3	chr10:23691800-23695600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr10:23692800-23697000	Weak transcription	Stomach Mucosa	stomach
5	chr10:23693000-23694400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:23693200-23694400	Enhancers	HSMMtube	muscle
7	chr10:23693800-23694400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr10:23693800-23696400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr10:23693800-23697200	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:23693800-23706400	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr10:23693800-23706400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr10:23694000-23694400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr10:23694000-23694400	Enhancers	Left Ventricle	heart
14	chr10:23694000-23701000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr10:23694200-23694600	Enhancers	Fetal Heart	heart
16	chr10:23694200-23695400	Enhancers	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links