Variant report

Variant	rs4855328
Chromosome Location	chr3:68353487-68353488
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:68344569..68347557-chr3:68353420..68355980,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs1010749	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12106777	0.82[EUR][1000 genomes]
rs1388498	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1388499	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1491764	1.00[CEU][hapmap]
rs17047635	1.00[CEU][hapmap];0.82[CHB][hapmap]
rs17047637	1.00[CEU][hapmap];0.89[CHB][hapmap]
rs17047651	1.00[CEU][hapmap]
rs17047694	1.00[CEU][hapmap]
rs17047725	1.00[CEU][hapmap]
rs3749216	1.00[CEU][hapmap];0.89[CHB][hapmap]
rs4855330	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs6549119	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs6773412	1.00[CEU][hapmap]
rs6801229	1.00[CEU][hapmap]
rs72626935	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72626936	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72626937	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72626938	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72626939	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72626956	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72626958	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72626961	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72626975	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72626976	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72626988	1.00[EUR][1000 genomes]
rs72626989	1.00[EUR][1000 genomes]
rs72626996	0.82[EUR][1000 genomes]
rs72626997	0.82[EUR][1000 genomes]
rs72627000	0.82[EUR][1000 genomes]
rs72627001	0.82[EUR][1000 genomes]
rs952769	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs957894	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[EUR][1000 genomes]
rs9829000	1.00[CEU][hapmap]
rs9859140	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752014	chr3:68091879-68416989	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv1010992	chr3:68353191-68388825	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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