Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10222670	0.84[TSI][hapmap];0.80[AMR][1000 genomes]
rs1039878	0.80[MEX][hapmap]
rs12489559	0.85[CEU][hapmap]
rs13069007	0.89[CEU][hapmap];0.83[JPT][hapmap]
rs13092201	0.85[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap]
rs17830081	0.83[EUR][1000 genomes]
rs17830713	0.81[CEU][hapmap]
rs1912457	0.89[TSI][hapmap];0.84[EUR][1000 genomes]
rs2136715	0.85[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs262201	0.83[EUR][1000 genomes]
rs4855467	0.89[CEU][hapmap];0.80[MEX][hapmap];0.98[TSI][hapmap];0.95[EUR][1000 genomes]
rs4855477	0.82[TSI][hapmap]
rs6549121	0.89[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6549122	0.89[TSI][hapmap];0.84[EUR][1000 genomes]
rs6767029	0.80[MEX][hapmap]
rs6785673	0.81[TSI][hapmap]
rs7633799	0.92[CEU][hapmap];0.81[JPT][hapmap]
rs876610	0.81[CEU][hapmap]
rs9310080	0.82[TSI][hapmap]
rs9822547	0.84[TSI][hapmap]
rs9822557	0.84[TSI][hapmap]
rs9833279	0.85[CEU][hapmap];0.83[JPT][hapmap]
rs9833308	0.85[CEU][hapmap];0.83[JPT][hapmap];0.87[MEX][hapmap];0.98[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834721	chr3:68365963-68526394	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv998582	chr3:68422687-68461190	Enhancers ZNF genes & repeats Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
3	nsv1006007	chr3:68451209-68474361	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	nsv1001320	chr3:68451209-68475128	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4855469	ADRA1A	trans	cerebellum	SCAN

Chromatin state (count:0 , 50 per page) page:

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