Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1039878	0.84[AMR][1000 genomes]
rs171893	0.81[CEU][hapmap]
rs17830081	0.93[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17830713	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs1912457	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2136715	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs262195	0.81[CEU][hapmap]
rs262198	0.81[CEU][hapmap]
rs4855467	0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs4855468	0.90[CEU][hapmap]
rs4855469	0.85[CEU][hapmap]
rs4855472	0.83[AMR][1000 genomes]
rs6549121	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6549122	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6767029	0.81[AMR][1000 genomes]
rs6767035	0.81[AMR][1000 genomes]
rs6785673	0.82[CEU][hapmap]
rs7633799	0.80[CEU][hapmap]
rs876609	0.87[EUR][1000 genomes]
rs876610	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs9822547	0.86[JPT][hapmap]
rs9822557	0.86[JPT][hapmap]
rs9830713	0.87[JPT][hapmap]
rs9842711	0.87[EUR][1000 genomes]
rs9850187	0.82[CEU][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834721	chr3:68365963-68526394	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv998582	chr3:68422687-68461190	Enhancers ZNF genes & repeats Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
3	nsv1006007	chr3:68451209-68474361	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	nsv1001320	chr3:68451209-68475128	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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