Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:103989692..103992041-chr8:103996933..103998764,2	MCF-7	breast:
2	chr8:103996495..103999134-chr8:104007444..104009301,2	MCF-7	breast:
3	chr8:103993356..103995449-chr8:103995905..103998523,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000254281	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10099603	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1512348	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1566158	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1849339	0.84[ASN][1000 genomes]
rs2679733	0.82[ASN][1000 genomes]
rs2679734	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2679738	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3018945	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs498193	0.88[ASN][1000 genomes]
rs515024	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs525817	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55801214	0.84[ASN][1000 genomes]
rs565338	0.81[ASN][1000 genomes]
rs575524	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs582100	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs600667	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs640903	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs693341	0.81[ASN][1000 genomes]
rs7816151	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7834163	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	esv3479710	chr8:103993376-103998574	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv3424698	chr8:103993626-103997924	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv824699	chr8:103993689-103998885	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv611831	chr8:103995624-104002664	Weak transcription Enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103990400-104011400	Weak transcription	Placenta	Placenta
2	chr8:103993400-104012400	Weak transcription	Spleen	Spleen
3	chr8:103994800-103999200	Enhancers	Primary B cells from peripheral blood	blood
4	chr8:103995800-103999400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr8:103996000-104001400	Weak transcription	Primary B cells from cord blood	blood
6	chr8:103996400-104001400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr8:103996400-104001800	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr8:103996400-104003200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr8:103996400-104003200	Weak transcription	Monocytes-CD14+_RO01746	blood

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