Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61695241..61697293-chr10:61702502..61705874,3	MCF-7	breast:
2	chr10:61694085..61696780-chr10:61751224..61753093,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10994077	0.86[ASN][1000 genomes]
rs10994080	0.86[ASN][1000 genomes]
rs10994081	0.85[ASN][1000 genomes]
rs10994082	0.86[ASN][1000 genomes]
rs10994083	0.85[ASN][1000 genomes]
rs1171847	0.85[ASN][1000 genomes]
rs16914411	0.84[ASN][1000 genomes]
rs2034200	0.85[ASN][1000 genomes]
rs3851249	0.86[ASN][1000 genomes]
rs4948377	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59486952	0.88[ASN][1000 genomes]
rs6479673	0.85[ASN][1000 genomes]
rs7069343	0.88[ASN][1000 genomes]
rs7073136	0.87[ASN][1000 genomes]
rs72811557	0.82[ASN][1000 genomes]
rs72811562	0.88[ASN][1000 genomes]
rs72816432	0.85[ASN][1000 genomes]
rs7897677	0.81[ASN][1000 genomes]
rs7912514	0.86[ASN][1000 genomes]
rs9888053	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1800316	chr10:61639599-61700473	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61695600-61696600	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr10:61695600-61696600	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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