Variant report

Variant	rs4984337
Chromosome Location	chr15:92633765-92633766
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:92633756..92635582-chr15:92847071..92849602,2	K562	blood:

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11638201	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1517619	0.86[EUR][1000 genomes]
rs1983350	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs207965	0.87[EUR][1000 genomes]
rs207969	0.87[EUR][1000 genomes]
rs207970	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs207971	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs207974	0.87[EUR][1000 genomes]
rs22198	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2238363	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2239295	0.87[EUR][1000 genomes]
rs4247080	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57006497	0.84[EUR][1000 genomes]
rs8041063	0.86[EUR][1000 genomes]
rs917355	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1668	chr15:92585344-92635991	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:92615000-92634200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr15:92619200-92638000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr15:92619400-92638400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr15:92619800-92638000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr15:92620800-92635600	Weak transcription	Spleen	Spleen
6	chr15:92621000-92638000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
7	chr15:92621000-92638000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr15:92621000-92639200	Weak transcription	Lung	lung
9	chr15:92621400-92634200	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr15:92621400-92638000	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr15:92623400-92640600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr15:92625600-92635200	Weak transcription	Right Atrium	heart
13	chr15:92625600-92638200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr15:92625800-92634800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr15:92626000-92651000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr15:92627400-92635400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr15:92627400-92641200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr15:92628600-92634200	Weak transcription	Fetal Brain Female	brain
19	chr15:92628800-92634200	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr15:92628800-92634200	Weak transcription	HUES64 Cell Line	embryonic stem cell
21	chr15:92629000-92634200	Weak transcription	HUES48 Cell Line	embryonic stem cell
22	chr15:92630800-92641800	Weak transcription	NHEK	skin
23	chr15:92631200-92638200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr15:92631400-92638200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr15:92631400-92640600	Weak transcription	Esophagus	oesophagus
26	chr15:92631400-92648800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr15:92632600-92641200	Weak transcription	Thymus	Thymus
28	chr15:92633000-92636600	Enhancers	Brain Hippocampus Middle	brain
29	chr15:92633200-92634200	Enhancers	Brain Cingulate Gyrus	brain
30	chr15:92633200-92637000	Enhancers	Brain Substantia Nigra	brain
31	chr15:92633400-92635000	Enhancers	Brain Angular Gyrus	brain
32	chr15:92633400-92635000	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr15:92633600-92634000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
34	chr15:92633600-92635200	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr15:92633600-92635400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr15:92633600-92635400	Enhancers	Right Ventricle	heart
37	chr15:92633600-92635600	Enhancers	Brain Anterior Caudate	brain
38	chr15:92633600-92636000	Enhancers	Left Ventricle	heart

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