Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs17005291	0.83[EUR][1000 genomes]
rs17005397	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17005400	1.00[EUR][1000 genomes]
rs34550101	0.87[ASN][1000 genomes]
rs4525874	0.88[ASN][1000 genomes]
rs4615083	1.00[EUR][1000 genomes]
rs4855355	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4855548	0.89[ASN][1000 genomes]
rs4855549	0.84[ASN][1000 genomes]
rs4855550	0.85[ASN][1000 genomes]
rs5017791	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55978846	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58798960	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60204248	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61207882	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6549183	0.83[EUR][1000 genomes]
rs6762052	0.90[ASN][1000 genomes]
rs6767493	0.90[ASN][1000 genomes]
rs6778830	0.86[ASN][1000 genomes]
rs6779171	0.87[ASN][1000 genomes]
rs7613159	0.87[ASN][1000 genomes]
rs7638997	0.89[ASN][1000 genomes]
rs881804	0.89[ASN][1000 genomes]
rs937863	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9815992	0.88[ASN][1000 genomes]
rs9825485	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9843043	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9864756	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv521439	chr3:69171803-69185740	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69175400-69178000	Enhancers	Psoas Muscle	Psoas
2	chr3:69175400-69179200	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr3:69176000-69179000	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr3:69176600-69177800	Weak transcription	Hela-S3	cervix
5	chr3:69177000-69178400	Enhancers	Placenta	Placenta
6	chr3:69177200-69177400	Enhancers	Fetal Muscle Leg	muscle

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