Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:69183723..69185886-chr3:69189955..69191851,2	K562	blood:
2	chr3:69159513..69161192-chr3:69185013..69186564,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11706756	0.87[ASN][1000 genomes]
rs17005397	0.84[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs34550101	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4525874	0.96[ASN][1000 genomes]
rs4855355	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs4855357	0.84[ASN][1000 genomes]
rs4855548	0.93[ASN][1000 genomes]
rs4855550	0.96[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs5017791	0.84[ASN][1000 genomes]
rs5017792	0.84[ASN][1000 genomes]
rs55978846	0.90[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs58798960	0.90[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs60204248	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs61207882	0.88[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs6762052	0.94[ASN][1000 genomes]
rs6767493	0.94[ASN][1000 genomes]
rs6778830	0.96[ASN][1000 genomes]
rs6779171	0.97[ASN][1000 genomes]
rs6806271	0.80[ASN][1000 genomes]
rs6808756	0.80[ASN][1000 genomes]
rs7613159	0.91[ASN][1000 genomes]
rs7638997	0.93[ASN][1000 genomes]
rs881804	0.93[ASN][1000 genomes]
rs937863	0.93[ASN][1000 genomes]
rs9815992	0.92[ASN][1000 genomes]
rs9825485	0.94[ASN][1000 genomes]
rs9843043	0.94[ASN][1000 genomes]
rs9853232	0.81[ASN][1000 genomes]
rs9864756	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv521439	chr3:69171803-69185740	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4855549	LMOD3	cis	Artery Tibial	GTEx
rs4855549	LMOD3	cis	Esophagus Muscularis	GTEx

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69178000-69193600	Weak transcription	Psoas Muscle	Psoas
2	chr3:69180200-69190600	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:69185600-69187000	Enhancers	Hela-S3	cervix

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