Variant report
Variant | rs4855357 |
---|---|
Chromosome Location | chr3:69204856-69204857 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11706756 | 0.81[ASN][1000 genomes] |
rs17005397 | 0.87[ASN][1000 genomes] |
rs34550101 | 0.87[ASN][1000 genomes] |
rs4525874 | 1.00[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs4855355 | 0.87[ASN][1000 genomes] |
rs4855548 | 0.83[ASN][1000 genomes] |
rs4855549 | 0.84[ASN][1000 genomes] |
rs4855550 | 0.85[ASN][1000 genomes] |
rs55978846 | 0.87[ASN][1000 genomes] |
rs58798960 | 0.87[ASN][1000 genomes] |
rs60204248 | 0.87[ASN][1000 genomes] |
rs61207882 | 0.87[ASN][1000 genomes] |
rs6762052 | 0.84[ASN][1000 genomes] |
rs6767493 | 0.84[ASN][1000 genomes] |
rs6778830 | 1.00[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs6779171 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs6806271 | 0.87[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs6808756 | 0.87[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs7613159 | 0.81[ASN][1000 genomes] |
rs7638997 | 0.83[ASN][1000 genomes] |
rs881804 | 0.83[ASN][1000 genomes] |
rs937863 | 0.83[ASN][1000 genomes] |
rs9815992 | 0.82[ASN][1000 genomes] |
rs9825485 | 0.84[ASN][1000 genomes] |
rs9843043 | 0.84[ASN][1000 genomes] |
rs9853232 | 1.00[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs9864756 | 0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv876933 | chr3:69059023-69227379 | Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 15 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:69204800-69205400 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |