Variant report

Variant	rs11706756
Chromosome Location	chr3:69188664-69188665
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs17005397	0.90[ASN][1000 genomes]
rs34550101	0.90[ASN][1000 genomes]
rs4525874	0.89[ASN][1000 genomes]
rs4855355	0.90[ASN][1000 genomes]
rs4855357	0.81[ASN][1000 genomes]
rs4855548	0.86[ASN][1000 genomes]
rs4855549	0.87[ASN][1000 genomes]
rs4855550	0.88[ASN][1000 genomes]
rs55978846	0.90[ASN][1000 genomes]
rs58798960	0.90[ASN][1000 genomes]
rs60204248	0.90[ASN][1000 genomes]
rs61207882	0.90[ASN][1000 genomes]
rs6762052	0.87[ASN][1000 genomes]
rs6767493	0.87[ASN][1000 genomes]
rs6778830	0.89[ASN][1000 genomes]
rs6779171	0.90[ASN][1000 genomes]
rs6781835	0.81[ASN][1000 genomes]
rs7613159	0.84[ASN][1000 genomes]
rs7638997	0.86[ASN][1000 genomes]
rs881804	0.86[ASN][1000 genomes]
rs937863	0.86[ASN][1000 genomes]
rs9815992	0.85[ASN][1000 genomes]
rs9825485	0.87[ASN][1000 genomes]
rs9835682	0.81[ASN][1000 genomes]
rs9843043	0.87[ASN][1000 genomes]
rs9859412	0.81[ASN][1000 genomes]
rs9864756	0.87[ASN][1000 genomes]
rs9883015	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876933	chr3:69059023-69227379	Enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69178000-69193600	Weak transcription	Psoas Muscle	Psoas
2	chr3:69180200-69190600	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:69187000-69190400	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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