Variant report

Variant	rs522980
Chromosome Location	chr19:56632793-56632794
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZBTB7A	chr19:56631493-56633228	K562	blood:	n/a	n/a
2	SRF	chr19:56632576-56632874	GM12878	blood:	n/a	n/a
3	NRF1	chr19:56631903-56633350	GM12878	blood:	n/a	chr19:56632990-56632999 chr19:56632988-56633002 chr19:56632892-56632901 chr19:56632985-56632999 chr19:56632345-56632356 chr19:56632522-56632531 chr19:56632988-56632999 chr19:56632988-56632999
4	STAT3	chr19:56632635-56633133	MCF10A-Er-Src	breast:	n/a	n/a
5	KAP1	chr19:56632752-56633549	HEK293	kidney:	n/a	n/a
6	ELF1	chr19:56632513-56633239	A549	lung:	n/a	chr19:56632608-56632617 chr19:56632942-56632951 chr19:56632941-56632952 chr19:56632677-56632686 chr19:56632820-56632833 chr19:56632603-56632615 chr19:56632941-56632952
7	NRF1	chr19:56631727-56633435	SK-N-SH	brain:	n/a	chr19:56632990-56632999 chr19:56632988-56633002 chr19:56632892-56632901 chr19:56631868-56631877 chr19:56632985-56632999 chr19:56632345-56632356 chr19:56632522-56632531 chr19:56632988-56632999 chr19:56632988-56632999
8	GTF2F1	chr19:56632637-56633067	H1-hESC	embryonic stem cell:	n/a	n/a
9	EP300	chr19:56632630-56633052	SK-N-SH_RA	brain:	n/a	chr19:56632657-56632664 chr19:56632942-56632949 chr19:56632822-56632829 chr19:56632826-56632833
10	GABPA	chr19:56631600-56633395	SK-N-SH	brain:	n/a	chr19:56632990-56632999 chr19:56632988-56633002 chr19:56632892-56632901 chr19:56631868-56631877 chr19:56632985-56632999 chr19:56632522-56632531 chr19:56632988-56632999
11	ZBTB7A	chr19:56632524-56633158	K562	blood:	n/a	n/a
12	MYC	chr19:56631627-56633281	MCF10A-Er-Src	breast:	n/a	chr19:56631814-56631821 chr19:56631717-56631727 chr19:56631812-56631821 chr19:56631811-56631821 chr19:56632523-56632533
13	MAZ	chr19:56631639-56633258	GM12878	blood:	n/a	chr19:56631814-56631821 chr19:56631717-56631727 chr19:56631812-56631821 chr19:56631811-56631821 chr19:56632523-56632533
14	STAT3	chr19:56632621-56633320	MCF10A-Er-Src	breast:	n/a	n/a
15	ZNF143	chr19:56632565-56633310	H1-hESC	embryonic stem cell:	n/a	chr19:56633105-56633123 chr19:56632776-56632786
16	POLR2A	chr19:56630139-56633317	K562	blood:	n/a	n/a
17	RAD21	chr19:56632695-56633269	H1-hESC	embryonic stem cell:	n/a	chr19:56632779-56632789
18	SP2	chr19:56632479-56633427	HepG2	liver:	n/a	n/a
19	ELF1	chr19:56632380-56633328	MCF-7	breast:	n/a	chr19:56632608-56632617 chr19:56632942-56632951 chr19:56632941-56632952 chr19:56632677-56632686 chr19:56632820-56632833 chr19:56632603-56632615 chr19:56632941-56632952
20	YY1	chr19:56632623-56633119	HCT-116	colon:	n/a	chr19:56632988-56633002 chr19:56632718-56632732 chr19:56632775-56632789 chr19:56632892-56632901 chr19:56632991-56633005
21	YY1	chr19:56632508-56633114	ECC-1	luminal epithelium:	n/a	chr19:56632522-56632531 chr19:56632988-56633002 chr19:56632718-56632732 chr19:56632602-56632616 chr19:56632775-56632789 chr19:56632892-56632901 chr19:56632609-56632620 chr19:56632991-56633005
22	POLR2A	chr19:56632523-56633286	U87	brain:	n/a	n/a
23	TAF1	chr19:56632531-56633097	Hela-S3	cervix:	n/a	n/a
24	SP2	chr19:56632489-56633292	H1-hESC	embryonic stem cell:	n/a	n/a
25	TAF7	chr19:56632482-56632998	H1-hESC	embryonic stem cell:	n/a	n/a
26	MAX	chr19:56631565-56633322	MCF-7	breast:	n/a	chr19:56631814-56631821 chr19:56631717-56631727 chr19:56631812-56631821 chr19:56631811-56631821 chr19:56632523-56632533
27	POLR2A	chr19:56632491-56633372	U87	brain:	n/a	n/a
28	ELF1	chr19:56632281-56633488	HCT-116	colon:	n/a	chr19:56632608-56632617 chr19:56632942-56632951 chr19:56632941-56632952 chr19:56632677-56632686 chr19:56632820-56632833 chr19:56632603-56632615 chr19:56632941-56632952
29	TAF1	chr19:56632600-56633156	H1-neurons	neurons:	n/a	n/a
30	EBF1	chr19:56632562-56633112	GM12878	blood:	n/a	n/a
31	RUNX3	chr19:56632508-56633392	GM12878	blood:	n/a	n/a
32	MAX	chr19:56631492-56633489	A549	lung:	n/a	chr19:56631814-56631821 chr19:56631717-56631727 chr19:56631812-56631821 chr19:56631811-56631821 chr19:56632523-56632533
33	CREB1	chr19:56631615-56633119	GM12878	blood:	n/a	n/a
34	PAX5	chr19:56632518-56633038	GM12878	blood:	n/a	chr19:56632909-56632918
35	CEBPD	chr19:56631587-56633174	HepG2	liver:	n/a	n/a
36	RCOR1	chr19:56632652-56633477	K562	blood:	n/a	n/a
37	TBL1XR1	chr19:56632684-56633371	K562	blood:	n/a	n/a
38	POLR2A	chr19:56630125-56633527	HepG2	liver:	n/a	n/a
39	POLR2A	chr19:56631036-56633396	K562	blood:	n/a	n/a
40	HA-E2F1	chr19:56632680-56633307	MCF-7	breast:	n/a	chr19:56632989-56632998 chr19:56632892-56632901 chr19:56632691-56632700
41	YY1	chr19:56632512-56633132	K562	blood:	n/a	chr19:56632522-56632531 chr19:56632988-56633002 chr19:56632718-56632732 chr19:56632602-56632616 chr19:56632775-56632789 chr19:56632892-56632901 chr19:56632609-56632620 chr19:56632991-56633005
42	PAX5	chr19:56632520-56633076	GM12892	blood:	n/a	chr19:56632909-56632918
43	ATF2	chr19:56632622-56632975	GM12878	blood:	n/a	n/a
44	MAX	chr19:56630829-56633527	HepG2	liver:	n/a	chr19:56631814-56631821 chr19:56631717-56631727 chr19:56631812-56631821 chr19:56631811-56631821 chr19:56632523-56632533
45	SP2	chr19:56632529-56633366	K562	blood:	n/a	n/a
46	TBL1XR1	chr19:56632602-56633499	GM12878	blood:	n/a	n/a
47	POLR2A	chr19:56632702-56633276	GM12891	blood:	n/a	n/a
48	SIN3AK20	chr19:56632646-56632966	PFSK-1	brain:	n/a	n/a
49	TAF1	chr19:56632400-56633274	H1-hESC	embryonic stem cell:	n/a	n/a
50	RFX5	chr19:56632718-56633110	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:56632746-56632796	AG04450	lung:	fetal
2	chr19:56632746-56632796	GM06990	blood:	n/a
3	chr19:56632746-56632796	GM19239	blood:	n/a
4	chr19:56632746-56632796	U87	brain:	n/a
5	chr19:56632746-56632796	HPAEpiC	pulmonary alveolar:	n/a
6	chr19:56632746-56632796	HRCEpiC	kidney:	n/a
7	chr19:56632746-56632796	SK-N-MC	brain:	n/a
8	chr19:56632746-56632796	NT2-D1	testis:	n/a
9	chr19:56632746-56632796	RPTEC	kidney:	n/a
10	chr19:56632746-56632796	HIPEpiC	eye:	n/a
11	chr19:56632746-56632796	SK-N-SH_RA	brain:	n/a
12	chr19:56632746-56632796	PANC-1	pancreas:	n/a
13	chr19:56632746-56632796	AG09319	gingival:	n/a
14	chr19:56632746-56632796	GM12891	blood:	n/a
15	chr19:56632746-56632796	ovcar-3	ovarian:	n/a
16	chr19:56632746-56632796	ProgFib	skin:	n/a
17	chr19:56632746-56632796	SAEC	small airway:	n/a
18	chr19:56632746-56632796	SKMC	muscle:	n/a
19	chr19:56632746-56632796	MCF10A-Er-Src	breast:	n/a
20	chr19:56632746-56632796	PFSK-1	brain:	n/a
21	chr19:56632746-56632796	ECC-1	luminal epithelium:	n/a
22	chr19:56632746-56632796	HMEC	breast:	n/a
23	chr19:56632746-56632796	HL-60	blood:	n/a
24	chr19:56632746-56632796	MCF-7	breast:	n/a
25	chr19:56632746-56632796	AG04449	skin:	fetal
26	chr19:56632746-56632796	GM12878	blood:	n/a
27	chr19:56632746-56632796	LNCaP	prostate:	n/a
28	chr19:56632746-56632796	HCM	heart:	n/a
29	chr19:56632746-56632796	BJ	skin:	n/a
30	chr19:56632746-56632796	HepG2	liver:	n/a
31	chr19:56632746-56632796	HRE	kidney:	n/a
32	chr19:56632746-56632796	HEK293	kidney:	embryo
33	chr19:56632746-56632796	K562	blood:	n/a
34	chr19:56632746-56632796	HCF	heart:	n/a
35	chr19:56632746-56632796	PrEC	prostate:	n/a
36	chr19:56632746-56632796	CMK	blood:	n/a
37	chr19:56632746-56632796	AoSMC	blood vessel:	n/a
38	chr19:56632746-56632796	IMR90	lung:	fetal
39	chr19:56632746-56632796	AG09309	skin:	n/a
40	chr19:56632746-56632796	BE2_C	brain:	n/a
41	chr19:56632746-56632796	T-47D	breast:	n/a
42	chr19:56632746-56632796	SK-N-SH	brain:	n/a
43	chr19:56632746-56632796	HEEpiC	esophagus:	n/a
44	chr19:56632746-56632796	NB4	blood:	n/a
45	chr19:56632746-56632796	AG10803	skin:	n/a
46	chr19:56632746-56632796	HCPEpiC	choroid plexus:	n/a
47	chr19:56632746-56632796	HRPEpiC	eye:	n/a
48	chr19:56632746-56632796	HCT-116	colon:	n/a
49	chr19:56632746-56632796	GM12892	blood:	n/a
50	chr19:56632746-56632796	NHBE	bronchial:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:56631390..56634909-chr19:56825062..56827444,3	MCF-7	breast:
2	chr19:56630391..56632820-chr19:56902199..56906311,3	K562	blood:
3	chr19:56632137..56632836-chr3:128902622..128903215,2	Hela-S3	cervix:
4	chr17:41150376..41150927-chr19:56632321..56632951,2	Hela-S3	cervix:
5	chr19:56632300..56632847-chr7:86781637..86782157,2	Hela-S3	cervix:
6	chr19:56164264..56167135-chr19:56631802..56633967,4	K562	blood:
7	chr19:56631391..56633030-chr19:56824712..56827583,2	K562	blood:
8	chr19:56627257..56634581-chr19:56650310..56656612,28	MCF-7	breast:
9	chr19:56629593..56636020-chr19:56650029..56654099,17	K562	blood:
10	chr15:83478077..83478694-chr19:56632004..56632840,2	Hela-S3	cervix:
11	chr19:56632216..56633155-chr19:56652902..56653633,2	K562	blood:
12	chr19:56632611..56633416-chr20:43976520..43977189,2	Hela-S3	cervix:
13	chr19:56630391..56632820-chr19:56902199..56904998,2	K562	blood:
14	chr19:56631659..56633594-chr19:56825559..56827609,3	MCF-7	breast:
15	chr19:56629593..56635165-chr19:56650391..56656450,20	K562	blood:
16	chr19:56165463..56168899-chr19:56631045..56633379,3	K562	blood:
17	chr19:56154949..56157092-chr19:56632186..56634615,2	K562	blood:
18	chr19:56629015..56635457-chr19:56649954..56657591,25	MCF-7	breast:

Variant related genes	Relation type
ZNF787	TF binding region
ZNF787	CpG island
ENSG00000267549	Chromatin interaction
ENSG00000135164	Chromatin interaction
ENSG00000018869	Chromatin interaction
ENSG00000171425	Chromatin interaction
ENSG00000169714	Chromatin interaction
ENSG00000131848	Chromatin interaction
ENSG00000267454	Chromatin interaction
ENSG00000224046	Chromatin interaction
ENSG00000124145	Chromatin interaction
ENSG00000156232	Chromatin interaction
ENSG00000063244	Chromatin interaction
ENSG00000167685	Chromatin interaction
ENSG00000131469	Chromatin interaction

Extended variants
information (count: 92 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs12459102	0.85[AMR][1000 genomes]
rs2450439	0.86[ASN][1000 genomes]
rs2631625	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2631627	0.93[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2631628	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2631631	0.90[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2631637	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2631640	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2637088	0.82[AMR][1000 genomes]
rs2637092	0.90[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2637094	0.91[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2637097	0.93[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2637114	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2932757	0.91[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs473953	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs478402	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs481936	0.88[AMR][1000 genomes]
rs490345	0.93[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs492078	0.82[AMR][1000 genomes]
rs497453	0.91[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs501798	0.81[AMR][1000 genomes]
rs504350	0.81[AMR][1000 genomes]
rs506547	0.97[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs509897	0.87[AMR][1000 genomes]
rs517021	0.82[ASN][1000 genomes]
rs517582	0.82[AMR][1000 genomes]
rs524778	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs524829	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs524988	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs525827	0.88[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs527715	0.88[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs533640	0.81[AMR][1000 genomes]
rs533734	0.81[AMR][1000 genomes]
rs535393	0.84[AMR][1000 genomes]
rs536342	0.81[AMR][1000 genomes]
rs536414	0.84[AMR][1000 genomes]
rs537425	0.84[AMR][1000 genomes]
rs544365	0.81[AMR][1000 genomes]
rs545570	0.85[AMR][1000 genomes]
rs547945	0.88[AMR][1000 genomes]
rs564050	0.84[AMR][1000 genomes]
rs564973	0.81[ASN][1000 genomes]
rs569310	0.86[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs572851	0.91[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs578990	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs578991	0.88[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs583330	0.95[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs588574	0.88[AMR][1000 genomes]
rs592827	0.97[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs599405	0.91[AMR][1000 genomes]
rs619934	0.88[AMR][1000 genomes]
rs626821	0.95[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs629544	0.97[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs630704	0.81[AMR][1000 genomes]
rs640654	0.95[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs642776	0.82[AMR][1000 genomes]
rs643133	0.88[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs643174	0.87[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs648352	0.82[AMR][1000 genomes]
rs659424	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs662308	0.90[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs662763	0.90[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs665082	0.91[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs665846	0.85[AMR][1000 genomes]
rs665857	0.90[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs667438	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs667523	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs667974	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs669866	0.83[AMR][1000 genomes]
rs677127	0.93[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs677142	0.80[AMR][1000 genomes]
rs678540	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs684653	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs685117	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056598	chr19:56331762-56703428	Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
2	nsv1064371	chr19:56418215-56842450	ZNF genes & repeats Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
3	nsv1057316	chr19:56418215-56849458	Strong transcription Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
4	nsv580354	chr19:56505685-56723492	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
5	nsv833883	chr19:56512601-56640089	Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
6	nsv523651	chr19:56537528-56707048	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
7	nsv1057820	chr19:56555942-56720262	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
8	nsv528998	chr19:56578238-56707048	Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
9	nsv912512	chr19:56592286-56636759	Enhancers Genic enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
10	nsv517365	chr19:56592286-56674548	Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
11	nsv912513	chr19:56592286-56685463	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
12	nsv521744	chr19:56592286-56686953	Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
13	nsv912514	chr19:56596815-56636759	Flanking Active TSS Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
14	nsv912516	chr19:56601298-56981382	Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	93 gene(s)	inside rSNPs	diseases
15	esv1809307	chr19:56604027-56633623	Enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
16	esv1824038	chr19:56610449-56636632	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
17	esv3331653	chr19:56631165-56634013	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	n/a
18	esv3409452	chr19:56631390-56633688	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:56631000-56633200	Active TSS	H9 Cell Line	embryonic stem cell
2	chr19:56631000-56633200	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr19:56631000-56633400	Active TSS	Small Intestine	intestine
4	chr19:56631000-56633600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr19:56631200-56632800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr19:56631200-56633400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr19:56631200-56633600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr19:56631200-56633600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr19:56631200-56633600	Active TSS	Pancreatic Islets	Pancreatic Islet
10	chr19:56631200-56633800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr19:56631400-56633200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr19:56631400-56633200	Active TSS	HUES6 Cell Line	embryonic stem cell
13	chr19:56631400-56633200	Active TSS	iPS-18 Cell Line	embryonic stem cell
14	chr19:56631400-56633200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr19:56631400-56633200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr19:56631400-56633200	Active TSS	Aorta	Aorta
17	chr19:56631400-56633200	Active TSS	Brain Substantia Nigra	brain
18	chr19:56631400-56633200	Active TSS	Colon Smooth Muscle	Colon
19	chr19:56631400-56633200	Active TSS	Left Ventricle	heart
20	chr19:56631400-56633200	Active TSS	A549	lung
21	chr19:56631400-56633200	Active TSS	HSMM	muscle
22	chr19:56631400-56633400	Active TSS	iPS-15b Cell Line	embryonic stem cell
23	chr19:56631400-56633400	Active TSS	iPS-20b Cell Line	embryonic stem cell
24	chr19:56631400-56633400	Active TSS	Gastric	stomach
25	chr19:56631400-56633400	Active TSS	Ovary	ovary
26	chr19:56631400-56633600	Active TSS	NH-A	brain
27	chr19:56631600-56633000	Active TSS	Primary monocytes fromperipheralblood	blood
28	chr19:56631600-56633000	Active TSS	Primary T cells from cord blood	blood
29	chr19:56631600-56633000	Active TSS	Primary hematopoietic stem cells short term culture	blood
30	chr19:56631600-56633000	Active TSS	Primary T helper cells PMA-I stimulated	--
31	chr19:56631600-56633000	Active TSS	Muscle Satellite Cultured Cells	--
32	chr19:56631600-56633000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr19:56631600-56633000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr19:56631600-56633000	Active TSS	Adipose Nuclei	Adipose
35	chr19:56631600-56633000	Active TSS	Liver	Liver
36	chr19:56631600-56633000	Active TSS	Fetal Adrenal Gland	Adrenal Gland
37	chr19:56631600-56633000	Weak transcription	Fetal Heart	heart
38	chr19:56631600-56633000	Active TSS	Fetal Intestine Large	intestine
39	chr19:56631600-56633000	Active TSS	Fetal Intestine Small	intestine
40	chr19:56631600-56633000	Active TSS	Sigmoid Colon	Sigmoid Colon
41	chr19:56631600-56633000	Active TSS	Thymus	Thymus
42	chr19:56631600-56633000	Active TSS	Hela-S3	cervix
43	chr19:56631600-56633000	Active TSS	HUVEC	blood vessel
44	chr19:56631600-56633000	Active TSS	Osteobl	bone
45	chr19:56631600-56633200	Active TSS	H1 Cell Line	embryonic stem cell
46	chr19:56631600-56633200	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr19:56631600-56633200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr19:56631600-56633200	Active TSS	HUES48 Cell Line	embryonic stem cell
49	chr19:56631600-56633200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr19:56631600-56633200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell

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