The 2.0 version of rSNPBase

Variant report

Variant rs583330
Chromosome Location chr19:56635019-56635020
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56633400-56635200 Enhancers Fetal Muscle Leg muscle
2 chr19:56633400-56636800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr19:56633400-56636800 Weak transcription HSMM muscle
4 chr19:56633400-56637000 Weak transcription Left Ventricle heart
5 chr19:56633600-56636200 Weak transcription Fetal Muscle Trunk muscle
6 chr19:56633600-56636800 Weak transcription Muscle Satellite Cultured Cells --
7 chr19:56633600-56636800 Weak transcription Colonic Mucosa Colon
8 chr19:56633600-56636800 Weak transcription Placenta Placenta
9 chr19:56633600-56636800 Weak transcription Pancreas Pancrea
10 chr19:56633600-56636800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr19:56633600-56636800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr19:56633600-56636800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr19:56633600-56636800 Weak transcription HSMMtube muscle
14 chr19:56633600-56637000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr19:56633600-56637000 Weak transcription Psoas Muscle Psoas
16 chr19:56633600-56637000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr19:56633600-56637200 Weak transcription Fetal Intestine Small intestine
18 chr19:56633600-56637400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr19:56633600-56637400 Enhancers Primary T cells fromperipheralblood blood
20 chr19:56633600-56637400 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr19:56633600-56637400 Enhancers Primary T helper cells fromperipheralblood blood
22 chr19:56633600-56637400 Weak transcription Fetal Intestine Large intestine
23 chr19:56633600-56637600 Weak transcription Duodenum Mucosa Duodenum
24 chr19:56633600-56638400 Weak transcription Spleen Spleen
25 chr19:56633600-56638800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr19:56633600-56639400 Enhancers Primary T cells from cord blood blood
27 chr19:56633800-56635400 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr19:56633800-56636600 Weak transcription K562 blood
29 chr19:56633800-56637000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr19:56633800-56637200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr19:56633800-56637400 Enhancers Primary T helper cells PMA-I stimulated --
32 chr19:56633800-56637800 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr19:56633800-56637800 Weak transcription Fetal Kidney kidney
34 chr19:56634000-56636200 Weak transcription HepG2 liver
35 chr19:56634000-56636400 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr19:56634000-56637400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr19:56634000-56640800 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr19:56634000-56645400 Weak transcription Primary hematopoietic stem cells blood
39 chr19:56634400-56638400 Enhancers Fetal Thymus thymus
40 chr19:56634800-56636800 Weak transcription Fetal Stomach stomach
41 chr19:56634800-56637400 Enhancers Thymus Thymus
42 chr19:56635000-56636800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015