Variant report

Variant rs684653
Chromosome Location chr19:56623343-56623344
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56593000-56631200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr19:56616000-56626600 Enhancers Primary T helper cells fromperipheralblood blood
3 chr19:56616000-56627000 Enhancers Liver Liver
4 chr19:56616000-56627200 Enhancers H1 Cell Line embryonic stem cell
5 chr19:56617200-56624400 Weak transcription Hela-S3 cervix
6 chr19:56617200-56629200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr19:56617400-56623400 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr19:56618200-56624400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr19:56618600-56630000 Weak transcription Dnd41 blood
10 chr19:56618800-56626400 Enhancers Fetal Thymus thymus
11 chr19:56619200-56624200 Enhancers Placenta Placenta
12 chr19:56619200-56627200 Enhancers Left Ventricle heart
13 chr19:56619600-56625000 Enhancers Fetal Heart heart
14 chr19:56619600-56627200 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr19:56619800-56623800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr19:56619800-56624800 Enhancers Fetal Intestine Large intestine
17 chr19:56619800-56625400 Enhancers Fetal Lung lung
18 chr19:56620000-56627000 Enhancers Primary monocytes fromperipheralblood blood
19 chr19:56620200-56623400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr19:56620200-56625000 Enhancers Rectal Mucosa Donor 31 rectum
21 chr19:56620400-56625400 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr19:56620400-56631000 Enhancers Pancreas Pancrea
23 chr19:56620600-56623400 Enhancers Right Ventricle heart
24 chr19:56620600-56623800 Weak transcription Fetal Brain Female brain
25 chr19:56620600-56625000 Enhancers Stomach Mucosa stomach
26 chr19:56620800-56625800 Enhancers Brain Hippocampus Middle brain
27 chr19:56620800-56626200 Enhancers Fetal Muscle Leg muscle
28 chr19:56620800-56627200 Enhancers Right Atrium heart
29 chr19:56620800-56630400 Enhancers Skeletal Muscle Female skeletal muscle
30 chr19:56620800-56631000 Weak transcription Aorta Aorta
31 chr19:56621000-56626000 Weak transcription NHEK skin
32 chr19:56621000-56630000 Weak transcription NHDF-Ad bronchial
33 chr19:56621400-56625400 Enhancers HUVEC blood vessel
34 chr19:56621600-56623400 Enhancers Brain Cingulate Gyrus brain
35 chr19:56621600-56623600 Enhancers Muscle Satellite Cultured Cells --
36 chr19:56621600-56623600 Enhancers HSMMtube muscle
37 chr19:56621600-56625000 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr19:56621600-56625000 Enhancers HSMM muscle
39 chr19:56621600-56625200 Enhancers Brain Substantia Nigra brain
40 chr19:56621600-56626600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr19:56621600-56626600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr19:56621600-56626800 Enhancers HUES6 Cell Line embryonic stem cell
43 chr19:56621800-56623600 Flanking Active TSS HepG2 liver
44 chr19:56621800-56624000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr19:56621800-56624800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr19:56621800-56624800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
47 chr19:56621800-56625000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr19:56621800-56625000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr19:56621800-56626400 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr19:56621800-56626600 Enhancers HUES64 Cell Line embryonic stem cell

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