Variant report

Variant rs659424
Chromosome Location chr19:56637491-56637492
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56633600-56637600 Weak transcription Duodenum Mucosa Duodenum
2 chr19:56633600-56638400 Weak transcription Spleen Spleen
3 chr19:56633600-56638800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:56633600-56639400 Enhancers Primary T cells from cord blood blood
5 chr19:56633800-56637800 Enhancers Primary T helper naive cells fromperipheralblood blood
6 chr19:56633800-56637800 Weak transcription Fetal Kidney kidney
7 chr19:56634000-56640800 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr19:56634000-56645400 Weak transcription Primary hematopoietic stem cells blood
9 chr19:56634400-56638400 Enhancers Fetal Thymus thymus
10 chr19:56636200-56639200 Enhancers Fetal Muscle Trunk muscle
11 chr19:56636200-56639200 Enhancers Fetal Muscle Leg muscle
12 chr19:56636800-56637800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr19:56636800-56637800 Enhancers Fetal Stomach stomach
14 chr19:56636800-56637800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
15 chr19:56636800-56637800 Flanking Active TSS HepG2 liver
16 chr19:56636800-56638400 Enhancers Placenta Placenta
17 chr19:56636800-56638600 Enhancers Pancreas Pancrea
18 chr19:56636800-56639000 Enhancers Colonic Mucosa Colon
19 chr19:56637000-56637800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr19:56637000-56637800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:56637000-56637800 Flanking Active TSS HSMM muscle
22 chr19:56637000-56637800 Flanking Active TSS K562 blood
23 chr19:56637000-56639200 Enhancers Rectal Mucosa Donor 31 rectum
24 chr19:56637200-56637800 Enhancers Fetal Intestine Small intestine
25 chr19:56637200-56637800 Enhancers Rectal Mucosa Donor 29 rectum
26 chr19:56637200-56637800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
27 chr19:56637400-56637600 Enhancers Muscle Satellite Cultured Cells --
28 chr19:56637400-56637600 Flanking Active TSS Fetal Lung lung
29 chr19:56637400-56637800 Enhancers Fetal Intestine Large intestine
30 chr19:56637400-56637800 Flanking Active TSS HSMMtube muscle
31 chr19:56637400-56645400 Weak transcription Sigmoid Colon Sigmoid Colon

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