Variant report

Variant rs626821
Chromosome Location chr19:56633605-56633606
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56631200-56633800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:56633000-56633800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
3 chr19:56633000-56633800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
4 chr19:56633000-56633800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:56633200-56633800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
6 chr19:56633200-56633800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
7 chr19:56633200-56633800 Flanking Active TSS A549 lung
8 chr19:56633400-56633800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
9 chr19:56633400-56633800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr19:56633400-56634600 Weak transcription Ovary ovary
11 chr19:56633400-56634800 Enhancers Fetal Stomach stomach
12 chr19:56633400-56635200 Enhancers Fetal Muscle Leg muscle
13 chr19:56633400-56636800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr19:56633400-56636800 Weak transcription HSMM muscle
15 chr19:56633400-56637000 Weak transcription Left Ventricle heart
16 chr19:56633600-56633800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:56633600-56633800 Active TSS iPS-18 Cell Line embryonic stem cell
18 chr19:56633600-56633800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:56633600-56633800 Enhancers Primary B cells from cord blood blood
20 chr19:56633600-56633800 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr19:56633600-56633800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr19:56633600-56633800 Active TSS Primary T regulatory cells fromperipheralblood blood
23 chr19:56633600-56633800 Enhancers Primary T killer naive cells fromperipheralblood blood
24 chr19:56633600-56633800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:56633600-56633800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr19:56633600-56633800 Enhancers Brain Anterior Caudate brain
27 chr19:56633600-56633800 Enhancers Colon Smooth Muscle Colon
28 chr19:56633600-56633800 Enhancers Fetal Kidney kidney
29 chr19:56633600-56633800 Enhancers Fetal Lung lung
30 chr19:56633600-56633800 Enhancers Rectal Mucosa Donor 29 rectum
31 chr19:56633600-56633800 Enhancers Dnd41 blood
32 chr19:56633600-56633800 Active TSS GM12878-XiMat blood
33 chr19:56633600-56633800 Enhancers Hela-S3 cervix
34 chr19:56633600-56633800 Enhancers K562 blood
35 chr19:56633600-56634000 Enhancers Primary neutrophils fromperipheralblood blood
36 chr19:56633600-56634000 Enhancers Primary hematopoietic stem cells blood
37 chr19:56633600-56634000 Enhancers Fetal Thymus thymus
38 chr19:56633600-56634000 Enhancers HepG2 liver
39 chr19:56633600-56634800 Weak transcription Thymus Thymus
40 chr19:56633600-56636200 Weak transcription Fetal Muscle Trunk muscle
41 chr19:56633600-56636800 Weak transcription Muscle Satellite Cultured Cells --
42 chr19:56633600-56636800 Weak transcription Colonic Mucosa Colon
43 chr19:56633600-56636800 Weak transcription Placenta Placenta
44 chr19:56633600-56636800 Weak transcription Pancreas Pancrea
45 chr19:56633600-56636800 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr19:56633600-56636800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr19:56633600-56636800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr19:56633600-56636800 Weak transcription HSMMtube muscle
49 chr19:56633600-56637000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr19:56633600-56637000 Weak transcription Psoas Muscle Psoas

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