Variant report

Variant	rs530773
Chromosome Location	chr10:97329754-97329755
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97319586..97322599-chr10:97327205..97330905,3	K562	blood:

Variant related genes	Relation type
ENSG00000095637	Chromatin interaction

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1078641	0.90[CHB][hapmap]
rs10882637	0.86[AMR][1000 genomes]
rs1254093	0.85[ASN][1000 genomes]
rs1270505	0.86[CHB][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs1272125	0.95[ASN][1000 genomes]
rs12767387	0.92[ASN][1000 genomes]
rs12767751	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12768725	0.90[ASN][1000 genomes]
rs12769076	0.90[ASN][1000 genomes]
rs1409710	1.00[YRI][hapmap]
rs493193	0.90[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs495998	0.85[ASN][1000 genomes]
rs498055	0.85[ASN][1000 genomes]
rs500470	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs524295	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs525807	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs526928	0.90[CHB][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs527043	0.90[CHB][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs533383	1.00[CEU][hapmap];0.85[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs568046	0.95[CEU][hapmap];0.90[CHB][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs576080	0.85[ASN][1000 genomes]
rs7070798	0.90[CHB][hapmap]
rs7086071	0.86[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7086880	0.96[ASN][1000 genomes]
rs7090870	0.99[ASN][1000 genomes]
rs7905711	0.86[AMR][1000 genomes]
rs7918947	0.86[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9630087	0.95[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97321600-97332200	Weak transcription	Right Ventricle	heart
2	chr10:97321800-97331800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr10:97321800-97332200	Weak transcription	Brain Anterior Caudate	brain
4	chr10:97326200-97332000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr10:97328400-97332000	Weak transcription	Fetal Lung	lung
6	chr10:97328400-97332000	Weak transcription	Fetal Stomach	stomach
7	chr10:97328400-97332000	Weak transcription	Right Atrium	heart
8	chr10:97328600-97332000	Weak transcription	Colon Smooth Muscle	Colon
9	chr10:97328800-97332200	Weak transcription	Stomach Smooth Muscle	stomach
10	chr10:97329000-97332000	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr10:97329200-97330800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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