Variant report

Variant rs548288
Chromosome Location chr3:135969755-135969756
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:135968600-135969800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
2 chr3:135968600-135969800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr3:135968600-135969800 Active TSS HUES48 Cell Line embryonic stem cell
4 chr3:135968600-135969800 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr3:135968600-135969800 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr3:135968600-135969800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:135968600-135969800 Active TSS Breast Myoepithelial Primary Cells Breast
8 chr3:135968600-135969800 Active TSS Primary T helper naive cells from peripheral blood blood
9 chr3:135968600-135969800 Active TSS Brain Anterior Caudate brain
10 chr3:135968600-135969800 Active TSS Fetal Brain Female brain
11 chr3:135968600-135969800 Active TSS Fetal Intestine Large intestine
12 chr3:135968600-135969800 Active TSS Skeletal Muscle Male skeletal muscle
13 chr3:135968600-135969800 Enhancers Spleen Spleen
14 chr3:135968600-135970000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:135968600-135970200 Active TSS Fetal Lung lung
16 chr3:135968600-135970200 Active TSS Rectal Smooth Muscle rectum
17 chr3:135968600-135970400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
18 chr3:135968600-135970400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr3:135968800-135969800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr3:135968800-135969800 Active TSS H9 Cell Line embryonic stem cell
21 chr3:135968800-135969800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
22 chr3:135968800-135969800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
23 chr3:135968800-135969800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
24 chr3:135968800-135969800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr3:135968800-135969800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr3:135968800-135969800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
27 chr3:135968800-135969800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:135968800-135969800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr3:135968800-135969800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr3:135968800-135969800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr3:135968800-135969800 Active TSS Colonic Mucosa Colon
32 chr3:135968800-135969800 Active TSS Duodenum Smooth Muscle Duodenum
33 chr3:135968800-135969800 Active TSS Esophagus oesophagus
34 chr3:135968800-135969800 Active TSS Fetal Intestine Small intestine
35 chr3:135968800-135969800 Active TSS Fetal Kidney kidney
36 chr3:135968800-135969800 Active TSS Fetal Stomach stomach
37 chr3:135968800-135969800 Active TSS Left Ventricle heart
38 chr3:135968800-135969800 Active TSS Lung lung
39 chr3:135968800-135969800 Active TSS Pancreas Pancrea
40 chr3:135968800-135969800 Active TSS Rectal Mucosa Donor 31 rectum
41 chr3:135968800-135969800 Active TSS Right Atrium heart
42 chr3:135968800-135969800 Active TSS Right Ventricle heart
43 chr3:135968800-135969800 Active TSS HSMM muscle
44 chr3:135968800-135970000 Active TSS ES-WA7 Cell Line embryonic stem cell
45 chr3:135968800-135970000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr3:135968800-135970000 Active TSS Brain Inferior Temporal Lobe brain
47 chr3:135968800-135970000 Active TSS Colon Smooth Muscle Colon
48 chr3:135968800-135970000 Active TSS Gastric stomach
49 chr3:135968800-135970000 Active TSS Ovary ovary
50 chr3:135968800-135970000 Active TSS Psoas Muscle Psoas

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