Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs12189719	0.92[EUR][1000 genomes]
rs12190567	0.92[EUR][1000 genomes]
rs12191511	0.88[EUR][1000 genomes]
rs12194266	0.92[EUR][1000 genomes]
rs12198579	1.00[EUR][1000 genomes]
rs12200410	0.92[EUR][1000 genomes]
rs12201340	1.00[EUR][1000 genomes]
rs12204343	0.92[EUR][1000 genomes]
rs12204405	0.92[EUR][1000 genomes]
rs12209732	0.92[EUR][1000 genomes]
rs12212603	0.89[ASN][1000 genomes]
rs12216494	0.92[EUR][1000 genomes]
rs1617072	1.00[EUR][1000 genomes]
rs1617978	1.00[EUR][1000 genomes]
rs1744556	0.88[EUR][1000 genomes]
rs1776477	1.00[EUR][1000 genomes]
rs28371453	0.92[EUR][1000 genomes]
rs34356441	0.81[AFR][1000 genomes]
rs55710454	0.86[AFR][1000 genomes]
rs56092197	1.00[EUR][1000 genomes]
rs56311230	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59408158	0.81[AFR][1000 genomes]
rs59685669	0.81[AFR][1000 genomes]
rs72827880	0.92[EUR][1000 genomes]
rs72827883	0.92[EUR][1000 genomes]
rs73725261	0.93[AFR][1000 genomes]
rs73725273	0.81[AFR][1000 genomes]
rs73725274	0.81[AFR][1000 genomes]
rs770936	0.96[EUR][1000 genomes]
rs797579	0.96[EUR][1000 genomes]
rs9477232	0.92[EUR][1000 genomes]
rs9477234	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758037	chr6:16873271-16912538	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv2759409	chr6:16873271-16912538	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv601016	chr6:16885017-16892412	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:16886400-16891200	Weak transcription	K562	blood
2	chr6:16886600-16890000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr6:16886600-16890600	Active TSS	HUES6 Cell Line	embryonic stem cell
4	chr6:16888600-16890600	Enhancers	Primary monocytes fromperipheralblood	blood

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