Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10092357	0.86[ASN][1000 genomes]
rs10104476	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10110842	0.84[EUR][1000 genomes]
rs10111157	0.86[ASN][1000 genomes]
rs10217049	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11777392	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1481753	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1600794	0.86[ASN][1000 genomes]
rs17190932	0.80[ASN][1000 genomes]
rs1842793	0.80[ASN][1000 genomes]
rs2086639	0.80[ASN][1000 genomes]
rs2086640	0.80[ASN][1000 genomes]
rs2101163	0.80[ASN][1000 genomes]
rs28558572	0.86[ASN][1000 genomes]
rs28855534	0.86[ASN][1000 genomes]
rs28892959	0.86[ASN][1000 genomes]
rs3885952	0.86[ASN][1000 genomes]
rs3963418	0.80[ASN][1000 genomes]
rs4385436	0.86[ASN][1000 genomes]
rs4501554	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4606023	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4733558	0.86[ASN][1000 genomes]
rs4733559	0.86[ASN][1000 genomes]
rs4733730	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4733731	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4733736	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59192669	0.80[ASN][1000 genomes]
rs60977383	0.80[ASN][1000 genomes]
rs61071273	0.80[ASN][1000 genomes]
rs62523852	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62523855	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7461495	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9297800	0.86[ASN][1000 genomes]
rs967974	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv8387	chr8:130711059-130756654	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891447	chr8:130724556-130754719	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130723200-130734600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:130723400-130740400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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