Variant report

Variant	rs4733736
Chromosome Location	chr8:130754097-130754098
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10092357	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10104476	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10108614	0.84[EUR][1000 genomes]
rs10111157	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10217049	0.86[ASN][1000 genomes]
rs1481753	0.86[ASN][1000 genomes]
rs1600794	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17190932	0.87[ASN][1000 genomes]
rs1842793	0.87[ASN][1000 genomes]
rs1967019	0.83[ASN][1000 genomes]
rs2086639	0.87[ASN][1000 genomes]
rs2086640	0.87[ASN][1000 genomes]
rs2101163	0.87[ASN][1000 genomes]
rs2624801	0.80[ASN][1000 genomes]
rs28558572	0.83[AFR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28855534	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28892959	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3885952	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3963418	0.87[ASN][1000 genomes]
rs4385436	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4501554	0.86[ASN][1000 genomes]
rs4606023	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4733558	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4733559	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4733730	0.86[ASN][1000 genomes]
rs4733731	0.86[ASN][1000 genomes]
rs4733735	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55654760	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59192669	0.87[ASN][1000 genomes]
rs60977383	0.87[ASN][1000 genomes]
rs61071273	0.87[ASN][1000 genomes]
rs62523852	0.86[ASN][1000 genomes]
rs62523855	0.86[ASN][1000 genomes]
rs62523857	0.86[EUR][1000 genomes]
rs7461495	0.86[ASN][1000 genomes]
rs9297800	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs967974	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv8387	chr8:130711059-130756654	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891447	chr8:130724556-130754719	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv428524	chr8:130731660-130894467	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130744000-130754800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:130745800-130754600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr8:130745800-130759800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr8:130751600-130760200	Weak transcription	Esophagus	oesophagus

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