The 2.0 version of rSNPBase

Variant report

Variant rs55789829
Chromosome Location chr3:100251052-100251053
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100238000-100252600 Weak transcription Fetal Intestine Small intestine
2 chr3:100238000-100265400 Weak transcription HSMMtube muscle
3 chr3:100241000-100299800 Weak transcription Fetal Muscle Leg muscle
4 chr3:100241200-100251800 Weak transcription Hela-S3 cervix
5 chr3:100242000-100253200 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr3:100242400-100265000 Weak transcription HepG2 liver
7 chr3:100242400-100268000 Weak transcription Ovary ovary
8 chr3:100244600-100261400 Weak transcription Fetal Lung lung
9 chr3:100244800-100253000 Weak transcription Esophagus oesophagus
10 chr3:100244800-100255400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr3:100244800-100257800 Weak transcription Spleen Spleen
12 chr3:100244800-100267000 Weak transcription HSMM muscle
13 chr3:100245200-100252000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:100245200-100252200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr3:100245200-100252200 Weak transcription Aorta Aorta
16 chr3:100245200-100253200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr3:100245400-100252200 Weak transcription Fetal Stomach stomach
18 chr3:100245400-100252400 Weak transcription Adipose Nuclei Adipose
19 chr3:100245400-100255800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr3:100245600-100254600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr3:100245800-100253200 Weak transcription HMEC breast
22 chr3:100246200-100252000 Weak transcription NHEK skin
23 chr3:100246400-100252000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr3:100246600-100251400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr3:100247200-100253200 Weak transcription Liver Liver
26 chr3:100249400-100251400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr3:100249400-100252400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:100249400-100252400 Weak transcription Gastric stomach
29 chr3:100250200-100253800 Enhancers Brain Germinal Matrix brain
30 chr3:100250800-100251600 Enhancers Brain Cingulate Gyrus brain
31 chr3:100250800-100253800 Enhancers Placenta Amnion Placenta Amnion
32 chr3:100250800-100255200 Enhancers NHDF-Ad bronchial
33 chr3:100251000-100251400 Enhancers Brain Hippocampus Middle brain
34 chr3:100251000-100251600 Enhancers Brain Substantia Nigra brain
35 chr3:100251000-100257400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015