The 2.0 version of rSNPBase

Variant report

Variant rs55877469
Chromosome Location chr7:27685371-27685372
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27654400-27696400 Weak transcription Gastric stomach
2 chr7:27658800-27687800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr7:27658800-27688600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr7:27660600-27701000 Weak transcription Right Ventricle heart
5 chr7:27661000-27688000 Weak transcription Stomach Smooth Muscle stomach
6 chr7:27661200-27694800 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr7:27661400-27688800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr7:27661400-27700800 Weak transcription Thymus Thymus
9 chr7:27661800-27686400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr7:27661800-27692200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr7:27661800-27694400 Weak transcription Lung lung
12 chr7:27662400-27686800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr7:27662600-27688200 Weak transcription Primary B cells from peripheral blood blood
14 chr7:27662800-27688000 Weak transcription Primary hematopoietic stem cells blood
15 chr7:27664800-27688200 Weak transcription K562 blood
16 chr7:27665000-27686000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr7:27667200-27686000 Weak transcription Fetal Muscle Trunk muscle
18 chr7:27668400-27687400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr7:27668600-27686800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr7:27670400-27686200 Weak transcription Fetal Stomach stomach
21 chr7:27671400-27701600 Weak transcription Spleen Spleen
22 chr7:27674000-27700800 Weak transcription H9 Cell Line embryonic stem cell
23 chr7:27674800-27686800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr7:27674800-27695200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr7:27675000-27700800 Weak transcription Rectal Smooth Muscle rectum
26 chr7:27675400-27701400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr7:27675600-27685800 Weak transcription Primary T cells fromperipheralblood blood
28 chr7:27675600-27686600 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr7:27675800-27686800 Weak transcription Dnd41 blood
30 chr7:27676000-27701600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr7:27676200-27693200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr7:27676200-27701600 Weak transcription Psoas Muscle Psoas
33 chr7:27676400-27687400 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr7:27676600-27700600 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr7:27676800-27687200 Weak transcription Primary B cells from cord blood blood
36 chr7:27676800-27692000 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr7:27677400-27701400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr7:27678400-27686800 Weak transcription Fetal Thymus thymus
39 chr7:27680000-27687200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr7:27680400-27701000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr7:27680800-27701200 Weak transcription Small Intestine intestine
42 chr7:27681000-27701200 Weak transcription Fetal Muscle Leg muscle
43 chr7:27681200-27685800 Weak transcription Fetal Intestine Large intestine
44 chr7:27681200-27686800 Weak transcription Ovary ovary
45 chr7:27681600-27686800 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr7:27681600-27686800 Weak transcription Primary T cells from cord blood blood
47 chr7:27681600-27686800 Weak transcription Adipose Nuclei Adipose
48 chr7:27681600-27687200 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr7:27681600-27687400 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr7:27681600-27687800 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015