Variant report
Variant | rs55917692 |
---|---|
Chromosome Location | chr5:91803424-91803425 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs55683670 | 0.86[EUR][1000 genomes] |
rs55889336 | 0.86[EUR][1000 genomes] |
rs56089411 | 0.93[EUR][1000 genomes] |
rs56137763 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs56327984 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs57858513 | 0.86[EUR][1000 genomes] |
rs66504658 | 0.86[EUR][1000 genomes] |
rs66897185 | 0.86[EUR][1000 genomes] |
rs67222609 | 0.86[EUR][1000 genomes] |
rs67283227 | 0.86[EUR][1000 genomes] |
rs67493321 | 0.80[EUR][1000 genomes] |
rs67655085 | 0.86[EUR][1000 genomes] |
rs67856059 | 0.86[EUR][1000 genomes] |
rs67992943 | 0.80[EUR][1000 genomes] |
rs72779018 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72779026 | 0.80[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs72779033 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs72779034 | 0.93[EUR][1000 genomes] |
rs72779039 | 0.80[EUR][1000 genomes] |
rs72779042 | 0.86[EUR][1000 genomes] |
rs72779049 | 0.86[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2763469 | chr5:91759081-91812497 | Enhancers ZNF genes & repeats Weak transcription Active TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:91803400-91804000 | Enhancers | HUES64 Cell Line | embryonic stem cell |