Variant report
| Variant | rs55950397 |
|---|---|
| Chromosome Location | chr4:99235992-99235993 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:99184000-99239600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 2 | chr4:99184200-99242200 | Weak transcription | A549 | lung |
| 3 | chr4:99185400-99239400 | Weak transcription | NHEK | skin |
| 4 | chr4:99206200-99239800 | Weak transcription | Aorta | Aorta |
| 5 | chr4:99210200-99250800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 6 | chr4:99212400-99239800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 7 | chr4:99212400-99287800 | Weak transcription | Thymus | Thymus |
| 8 | chr4:99214200-99240800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 9 | chr4:99215000-99317000 | Weak transcription | Left Ventricle | heart |
| 10 | chr4:99216800-99236000 | Weak transcription | HUVEC | blood vessel |
| 11 | chr4:99216800-99236000 | Weak transcription | NH-A | brain |
| 12 | chr4:99216800-99236000 | Weak transcription | NHDF-Ad | bronchial |
| 13 | chr4:99216800-99239200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 14 | chr4:99217000-99237400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 15 | chr4:99217000-99239400 | Weak transcription | HMEC | breast |
| 16 | chr4:99219000-99252000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 17 | chr4:99219600-99236400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 18 | chr4:99219600-99244600 | Weak transcription | Fetal Thymus | thymus |
| 19 | chr4:99223800-99288000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 20 | chr4:99224400-99240000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 21 | chr4:99224400-99247400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 22 | chr4:99225200-99253400 | Weak transcription | Fetal Lung | lung |
| 23 | chr4:99225400-99240600 | Weak transcription | Primary B cells from cord blood | blood |
| 24 | chr4:99225600-99236000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 25 | chr4:99226400-99238800 | Weak transcription | Fetal Intestine Small | intestine |
| 26 | chr4:99226600-99239200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 27 | chr4:99227000-99243000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 28 | chr4:99227200-99238000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 29 | chr4:99227400-99236400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr4:99227800-99236200 | Weak transcription | Primary T cells from cord blood | blood |
| 31 | chr4:99229200-99239600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr4:99229800-99241000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 33 | chr4:99231200-99249000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 34 | chr4:99232400-99247800 | Weak transcription | Brain Hippocampus Middle | brain |
| 35 | chr4:99232800-99237600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 36 | chr4:99233200-99236800 | Weak transcription | GM12878-XiMat | blood |
| 37 | chr4:99233400-99238200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 38 | chr4:99233600-99243000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 39 | chr4:99234400-99238200 | Strong transcription | Dnd41 | blood |
| 40 | chr4:99235000-99237600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 41 | chr4:99235000-99242400 | Weak transcription | Pancreas | Pancrea |
| 42 | chr4:99235200-99236200 | Enhancers | Osteobl | bone |
| 43 | chr4:99235200-99237200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 44 | chr4:99235400-99237200 | Enhancers | HSMMtube | muscle |
| 45 | chr4:99235600-99237400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 46 | chr4:99235600-99237400 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 47 | chr4:99235800-99236000 | Genic enhancers | HSMM | muscle |
| 48 | chr4:99235800-99236800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
