Variant report
| Variant | rs56075971 |
|---|---|
| Chromosome Location | chr4:99189373-99189374 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:99183400-99194200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr4:99183600-99198200 | Weak transcription | Ovary | ovary |
| 3 | chr4:99183600-99205400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr4:99184000-99193200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 5 | chr4:99184000-99196000 | Weak transcription | Esophagus | oesophagus |
| 6 | chr4:99184000-99197000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 7 | chr4:99184000-99205800 | Weak transcription | Gastric | stomach |
| 8 | chr4:99184000-99210400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 9 | chr4:99184000-99239600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 10 | chr4:99184200-99192800 | Weak transcription | HSMM | muscle |
| 11 | chr4:99184200-99195200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 12 | chr4:99184200-99196800 | Weak transcription | Fetal Thymus | thymus |
| 13 | chr4:99184200-99199000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 14 | chr4:99184200-99205800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 15 | chr4:99184200-99205800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr4:99184200-99210000 | Weak transcription | HSMMtube | muscle |
| 17 | chr4:99184200-99242200 | Weak transcription | A549 | lung |
| 18 | chr4:99184400-99190400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 19 | chr4:99184400-99190600 | Weak transcription | Fetal Lung | lung |
| 20 | chr4:99184600-99205800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 21 | chr4:99184600-99211800 | Weak transcription | NHLF | lung |
| 22 | chr4:99184800-99193200 | Weak transcription | Thymus | Thymus |
| 23 | chr4:99184800-99195800 | Weak transcription | Brain Hippocampus Middle | brain |
| 24 | chr4:99184800-99197000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 25 | chr4:99184800-99197200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 26 | chr4:99185000-99193200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 27 | chr4:99185000-99197800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 28 | chr4:99185000-99199600 | Weak transcription | NHDF-Ad | bronchial |
| 29 | chr4:99185000-99204400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr4:99185000-99206600 | Weak transcription | NH-A | brain |
| 31 | chr4:99185200-99193000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr4:99185200-99193600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 33 | chr4:99185200-99196400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 34 | chr4:99185200-99197200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr4:99185200-99205600 | Weak transcription | HMEC | breast |
| 36 | chr4:99185400-99239400 | Weak transcription | NHEK | skin |
| 37 | chr4:99186200-99205800 | Weak transcription | HUVEC | blood vessel |
| 38 | chr4:99186400-99193000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 39 | chr4:99186600-99190200 | Weak transcription | Brain Angular Gyrus | brain |
| 40 | chr4:99186600-99210000 | Weak transcription | K562 | blood |
| 41 | chr4:99186800-99195800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 42 | chr4:99187000-99193000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 43 | chr4:99187000-99193200 | Weak transcription | Primary T cells from cord blood | blood |
| 44 | chr4:99187000-99196800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr4:99187000-99202800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 46 | chr4:99188000-99189600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 47 | chr4:99188200-99190600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 48 | chr4:99188400-99190200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr4:99188600-99189400 | Genic enhancers | Dnd41 | blood |
| 50 | chr4:99188800-99189600 | Strong transcription | Primary B cells from cord blood | blood |
