The 2.0 version of rSNPBase

Variant report

Variant rs56030651
Chromosome Location chr4:99338945-99338946
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99288400-99342400 Weak transcription A549 lung
2 chr4:99290600-99346000 Weak transcription Fetal Lung lung
3 chr4:99299400-99350800 Weak transcription NHLF lung
4 chr4:99307000-99366200 Weak transcription Fetal Brain Male brain
5 chr4:99308600-99363200 Weak transcription Rectal Smooth Muscle rectum
6 chr4:99312000-99355400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr4:99317600-99342200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr4:99317800-99342800 Weak transcription HSMMtube muscle
9 chr4:99319200-99341800 Weak transcription HMEC breast
10 chr4:99325800-99367000 Weak transcription Right Ventricle heart
11 chr4:99326400-99342200 Weak transcription Brain Angular Gyrus brain
12 chr4:99327800-99355400 Weak transcription Brain Cingulate Gyrus brain
13 chr4:99330800-99342200 Weak transcription Brain Substantia Nigra brain
14 chr4:99333400-99342200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr4:99333800-99342200 Weak transcription Brain Anterior Caudate brain
16 chr4:99334000-99339000 Weak transcription Muscle Satellite Cultured Cells --
17 chr4:99334000-99339800 Weak transcription Fetal Stomach stomach
18 chr4:99334000-99342200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr4:99334000-99355000 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr4:99334200-99339200 Weak transcription Colon Smooth Muscle Colon
21 chr4:99334200-99339800 Weak transcription Ovary ovary
22 chr4:99334200-99339800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr4:99334200-99340000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr4:99334200-99342000 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr4:99334200-99342000 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr4:99334200-99342200 Weak transcription Brain Hippocampus Middle brain
27 chr4:99334200-99342200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr4:99334200-99342400 Weak transcription Pancreas Pancrea
29 chr4:99334200-99342400 Weak transcription GM12878-XiMat blood
30 chr4:99334200-99345000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr4:99334200-99350800 Weak transcription NHEK skin
32 chr4:99334200-99355200 Weak transcription Fetal Kidney kidney
33 chr4:99334200-99355800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:99334400-99339800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr4:99334400-99340000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr4:99334400-99340000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr4:99334400-99340000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr4:99334400-99340200 Weak transcription Left Ventricle heart
39 chr4:99334400-99341200 Weak transcription Fetal Muscle Trunk muscle
40 chr4:99334400-99341600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr4:99334400-99341600 Weak transcription Duodenum Mucosa Duodenum
42 chr4:99334400-99341800 Weak transcription Fetal Muscle Leg muscle
43 chr4:99334400-99342200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr4:99334400-99342200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr4:99334400-99342200 Weak transcription Placenta Placenta
46 chr4:99334400-99342400 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr4:99334400-99342400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr4:99334400-99342400 Weak transcription Thymus Thymus
49 chr4:99334400-99343000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr4:99334400-99343800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015