The 2.0 version of rSNPBase

Variant report

Variant rs57375402
Chromosome Location chr4:99202416-99202417
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99183600-99205400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr4:99184000-99205800 Weak transcription Gastric stomach
3 chr4:99184000-99210400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr4:99184000-99239600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr4:99184200-99205800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr4:99184200-99205800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr4:99184200-99210000 Weak transcription HSMMtube muscle
8 chr4:99184200-99242200 Weak transcription A549 lung
9 chr4:99184600-99205800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr4:99184600-99211800 Weak transcription NHLF lung
11 chr4:99185000-99204400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr4:99185000-99206600 Weak transcription NH-A brain
13 chr4:99185200-99205600 Weak transcription HMEC breast
14 chr4:99185400-99239400 Weak transcription NHEK skin
15 chr4:99186200-99205800 Weak transcription HUVEC blood vessel
16 chr4:99186600-99210000 Weak transcription K562 blood
17 chr4:99187000-99202800 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr4:99189600-99204200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr4:99192000-99205800 Weak transcription Psoas Muscle Psoas
20 chr4:99194000-99215400 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr4:99194400-99204200 Weak transcription Muscle Satellite Cultured Cells --
22 chr4:99194400-99205800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr4:99194400-99206000 Weak transcription Aorta Aorta
24 chr4:99194600-99214600 Weak transcription Liver Liver
25 chr4:99196000-99204400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr4:99196400-99204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr4:99196600-99214200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr4:99197000-99214600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr4:99197400-99202600 Weak transcription Primary hematopoietic stem cells blood
30 chr4:99197400-99204000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr4:99197400-99205000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:99197400-99205800 Weak transcription Left Ventricle heart
33 chr4:99197400-99210000 Weak transcription Fetal Thymus thymus
34 chr4:99197600-99204000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr4:99197600-99205800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr4:99197600-99210000 Weak transcription Primary B cells from peripheral blood blood
37 chr4:99197600-99210000 Weak transcription Primary T cells from cord blood blood
38 chr4:99198400-99205000 Weak transcription HSMM muscle
39 chr4:99198400-99205800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr4:99198400-99210000 Weak transcription Primary B cells from cord blood blood
41 chr4:99198600-99204200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr4:99199400-99204400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015