The 2.0 version of rSNPBase

Variant report

Variant rs60998950
Chromosome Location chr4:99345182-99345183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99290600-99346000 Weak transcription Fetal Lung lung
2 chr4:99299400-99350800 Weak transcription NHLF lung
3 chr4:99307000-99366200 Weak transcription Fetal Brain Male brain
4 chr4:99308600-99363200 Weak transcription Rectal Smooth Muscle rectum
5 chr4:99312000-99355400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr4:99325800-99367000 Weak transcription Right Ventricle heart
7 chr4:99327800-99355400 Weak transcription Brain Cingulate Gyrus brain
8 chr4:99334000-99355000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr4:99334200-99350800 Weak transcription NHEK skin
10 chr4:99334200-99355200 Weak transcription Fetal Kidney kidney
11 chr4:99334200-99355800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr4:99334400-99345200 Weak transcription Brain Germinal Matrix brain
13 chr4:99334400-99355200 Weak transcription Fetal Intestine Large intestine
14 chr4:99334400-99361800 Weak transcription Aorta Aorta
15 chr4:99334400-99364600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:99334400-99366000 Weak transcription Psoas Muscle Psoas
17 chr4:99334400-99367400 Weak transcription Small Intestine intestine
18 chr4:99334400-99368800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr4:99336400-99365000 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr4:99337200-99356000 Weak transcription Esophagus oesophagus
21 chr4:99337200-99363200 Weak transcription Brain Inferior Temporal Lobe brain
22 chr4:99337600-99351200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr4:99337600-99369800 Weak transcription Fetal Heart heart
24 chr4:99337800-99346200 Strong transcription Primary B cells from cord blood blood
25 chr4:99337800-99346400 Strong transcription Dnd41 blood
26 chr4:99337800-99346600 Strong transcription Primary B cells from peripheral blood blood
27 chr4:99337800-99346600 Strong transcription Primary T regulatory cells fromperipheralblood blood
28 chr4:99337800-99346800 Strong transcription Primary hematopoietic stem cells blood
29 chr4:99337800-99346800 Strong transcription Adipose Nuclei Adipose
30 chr4:99337800-99347000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr4:99337800-99347400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:99338000-99346200 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr4:99338000-99346800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr4:99338000-99347000 Strong transcription HSMM muscle
35 chr4:99338000-99347400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr4:99338000-99347600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:99338200-99346800 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr4:99338400-99345600 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr4:99338400-99363200 Weak transcription Spleen Spleen
40 chr4:99338600-99345200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr4:99338800-99347000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr4:99339000-99363200 Weak transcription Colonic Mucosa Colon
43 chr4:99339000-99370200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr4:99340600-99345200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr4:99340800-99370600 Weak transcription Colon Smooth Muscle Colon
46 chr4:99341200-99365000 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr4:99341600-99345200 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr4:99341600-99346000 Strong transcription Duodenum Mucosa Duodenum
49 chr4:99341600-99346200 Strong transcription Primary T cells fromperipheralblood blood
50 chr4:99341600-99346800 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015