Variant report

Variant	rs73832310
Chromosome Location	chr4:99380423-99380424
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 117 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:112)

rs_ID	r²[population]
rs55634286	1.00[AMR][1000 genomes]
rs55699140	1.00[AMR][1000 genomes]
rs55913300	1.00[AMR][1000 genomes]
rs55942043	1.00[AMR][1000 genomes]
rs55950397	1.00[AMR][1000 genomes]
rs55987744	1.00[AMR][1000 genomes]
rs56022708	1.00[AMR][1000 genomes]
rs56030651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56032135	1.00[AMR][1000 genomes]
rs56038362	1.00[AMR][1000 genomes]
rs56075971	1.00[AMR][1000 genomes]
rs56081533	1.00[AMR][1000 genomes]
rs56110006	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56128838	1.00[AMR][1000 genomes]
rs56199712	1.00[AMR][1000 genomes]
rs56262026	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56743102	1.00[AMR][1000 genomes]
rs56813590	1.00[AMR][1000 genomes]
rs57012386	1.00[AMR][1000 genomes]
rs57375402	1.00[AMR][1000 genomes]
rs57678573	1.00[AMR][1000 genomes]
rs57911361	1.00[AMR][1000 genomes]
rs58507370	1.00[AMR][1000 genomes]
rs58579740	1.00[AMR][1000 genomes]
rs59399028	1.00[AMR][1000 genomes]
rs59643301	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59911323	1.00[AMR][1000 genomes]
rs59980453	1.00[AMR][1000 genomes]
rs60107453	1.00[AMR][1000 genomes]
rs60148186	1.00[AMR][1000 genomes]
rs60218968	1.00[AMR][1000 genomes]
rs60460868	1.00[AMR][1000 genomes]
rs60467192	1.00[AMR][1000 genomes]
rs60473964	1.00[AMR][1000 genomes]
rs60502057	1.00[AMR][1000 genomes]
rs60551470	1.00[AMR][1000 genomes]
rs60883587	1.00[AMR][1000 genomes]
rs60969041	1.00[AMR][1000 genomes]
rs60998950	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61537932	1.00[AMR][1000 genomes]
rs6814760	1.00[AMR][1000 genomes]
rs73832169	1.00[AMR][1000 genomes]
rs73832170	1.00[AMR][1000 genomes]
rs73832171	1.00[AMR][1000 genomes]
rs73832172	1.00[AMR][1000 genomes]
rs73832174	1.00[AMR][1000 genomes]
rs73832175	1.00[AMR][1000 genomes]
rs73832177	1.00[AMR][1000 genomes]
rs73832178	1.00[AMR][1000 genomes]
rs73832179	1.00[AMR][1000 genomes]
rs73832180	1.00[AMR][1000 genomes]
rs73832181	1.00[AMR][1000 genomes]
rs73832184	1.00[AMR][1000 genomes]
rs73832185	1.00[AMR][1000 genomes]
rs73832186	1.00[AMR][1000 genomes]
rs73832187	1.00[AMR][1000 genomes]
rs73832188	1.00[AMR][1000 genomes]
rs73832189	1.00[AMR][1000 genomes]
rs73832190	1.00[AMR][1000 genomes]
rs73832194	1.00[AMR][1000 genomes]
rs73832195	1.00[AMR][1000 genomes]
rs73832197	1.00[AMR][1000 genomes]
rs73832198	1.00[AMR][1000 genomes]
rs73832199	1.00[AMR][1000 genomes]
rs73832202	1.00[AMR][1000 genomes]
rs73832303	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832304	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832312	1.00[AMR][1000 genomes]
rs73832313	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832314	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832315	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73832327	1.00[AMR][1000 genomes]
rs73834405	1.00[AMR][1000 genomes]
rs73834408	1.00[AMR][1000 genomes]
rs73834410	1.00[AMR][1000 genomes]
rs73834413	1.00[AMR][1000 genomes]
rs73834415	1.00[AMR][1000 genomes]
rs73834418	1.00[AMR][1000 genomes]
rs73834420	1.00[AMR][1000 genomes]
rs73834421	1.00[AMR][1000 genomes]
rs73834422	1.00[AMR][1000 genomes]
rs73834425	1.00[AMR][1000 genomes]
rs73834428	1.00[AMR][1000 genomes]
rs73834430	1.00[AMR][1000 genomes]
rs73834432	1.00[AMR][1000 genomes]
rs73834433	1.00[AMR][1000 genomes]
rs73834440	1.00[AMR][1000 genomes]
rs73834441	1.00[AMR][1000 genomes]
rs73834442	1.00[AMR][1000 genomes]
rs73834446	1.00[AMR][1000 genomes]
rs73834447	1.00[AMR][1000 genomes]
rs73834448	1.00[AMR][1000 genomes]
rs73834449	1.00[AMR][1000 genomes]
rs73834450	1.00[AMR][1000 genomes]
rs73834451	1.00[AMR][1000 genomes]
rs73834457	1.00[AMR][1000 genomes]
rs73834458	1.00[AMR][1000 genomes]
rs73834459	1.00[AMR][1000 genomes]
rs73834460	1.00[AMR][1000 genomes]
rs73834462	1.00[AMR][1000 genomes]
rs73834463	1.00[AMR][1000 genomes]
rs73834464	1.00[AMR][1000 genomes]
rs73834465	1.00[AMR][1000 genomes]
rs73834469	1.00[AMR][1000 genomes]
rs73834472	1.00[AMR][1000 genomes]
rs73834473	1.00[AMR][1000 genomes]
rs73834477	1.00[AMR][1000 genomes]
rs73834483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73834484	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73834486	1.00[AMR][1000 genomes]
rs73834488	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73834491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529623	chr4:98501338-99460166	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	esv2763801	chr4:99094892-99413853	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	esv2754250	chr4:99094922-99527122	Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
4	nsv879651	chr4:99105055-99441349	Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
5	nsv1004181	chr4:99208152-99529576	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99364000-99380800	Weak transcription	Brain Angular Gyrus	brain

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