The 2.0 version of rSNPBase

Variant report

Variant rs55998335
Chromosome Location chr6:143903943-143903944
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143866800-143904600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr6:143894400-143907600 Weak transcription Stomach Mucosa stomach
3 chr6:143895600-143918200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:143897600-143907600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr6:143899400-143918000 Weak transcription Spleen Spleen
6 chr6:143899800-143919200 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr6:143900400-143907000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr6:143900800-143918200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:143901000-143904400 Weak transcription NHDF-Ad bronchial
10 chr6:143901000-143905000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:143901000-143907400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:143901200-143918000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr6:143901400-143904800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:143901400-143906200 Weak transcription Fetal Muscle Trunk muscle
15 chr6:143902400-143905000 Weak transcription Left Ventricle heart
16 chr6:143903200-143904200 Weak transcription Placenta Placenta
17 chr6:143903200-143904400 Weak transcription Fetal Muscle Leg muscle
18 chr6:143903200-143905200 Enhancers Hela-S3 cervix
19 chr6:143903200-143912600 Weak transcription Primary T cells fromperipheralblood blood
20 chr6:143903400-143904800 Weak transcription NH-A brain
21 chr6:143903400-143905800 Weak transcription Fetal Intestine Small intestine
22 chr6:143903400-143911800 Weak transcription Fetal Intestine Large intestine
23 chr6:143903400-143918200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr6:143903600-143907600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:143903600-143912200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr6:143903600-143918600 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr6:143903800-143904800 Weak transcription Muscle Satellite Cultured Cells --
28 chr6:143903800-143904800 Weak transcription Osteobl bone
29 chr6:143903800-143905400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015