Variant report
| Variant | rs56029925 |
|---|---|
| Chromosome Location | chr1:228266932-228266933 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:228248200-228269000 | Weak transcription | Right Atrium | heart |
| 2 | chr1:228258600-228269000 | Weak transcription | Esophagus | oesophagus |
| 3 | chr1:228260200-228268000 | Weak transcription | Gastric | stomach |
| 4 | chr1:228260200-228269000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr1:228261200-228267600 | Weak transcription | Ovary | ovary |
| 6 | chr1:228261600-228269000 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr1:228262200-228268800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 8 | chr1:228263000-228268800 | Weak transcription | Adipose Nuclei | Adipose |
| 9 | chr1:228263000-228269200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr1:228263600-228267000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 11 | chr1:228263600-228268800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr1:228263800-228269200 | Weak transcription | Fetal Lung | lung |
| 13 | chr1:228264000-228268800 | Weak transcription | Fetal Muscle Leg | muscle |
| 14 | chr1:228264800-228268800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr1:228265000-228268800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 16 | chr1:228265000-228268800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 17 | chr1:228265200-228269000 | Weak transcription | NHLF | lung |
| 18 | chr1:228265400-228268800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 19 | chr1:228265600-228267200 | Weak transcription | Fetal Brain Male | brain |
| 20 | chr1:228265600-228268000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 21 | chr1:228265600-228268800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr1:228265600-228268800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 23 | chr1:228265600-228268800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 24 | chr1:228265600-228269000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 25 | chr1:228265600-228269000 | Weak transcription | A549 | lung |
| 26 | chr1:228265800-228267800 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 27 | chr1:228265800-228268600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 28 | chr1:228265800-228269000 | Weak transcription | Fetal Intestine Small | intestine |
| 29 | chr1:228266000-228267200 | Weak transcription | Spleen | Spleen |
| 30 | chr1:228266000-228267600 | Weak transcription | Pancreas | Pancrea |
| 31 | chr1:228266000-228268600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 32 | chr1:228266000-228268800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 33 | chr1:228266000-228269000 | Weak transcription | Lung | lung |
| 34 | chr1:228266000-228269200 | Weak transcription | Left Ventricle | heart |
| 35 | chr1:228266200-228267000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 36 | chr1:228266200-228268800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 37 | chr1:228266200-228268800 | Weak transcription | HUVEC | blood vessel |
| 38 | chr1:228266400-228267200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 39 | chr1:228266400-228267600 | Weak transcription | Dnd41 | blood |
| 40 | chr1:228266400-228267800 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
| 41 | chr1:228266400-228269000 | Weak transcription | NHEK | skin |
| 42 | chr1:228266600-228267000 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 43 | chr1:228266600-228267000 | Bivalent Enhancer | HUES6 Cell Line | embryonic stem cell |
| 44 | chr1:228266600-228267000 | Bivalent Enhancer | iPS-18 Cell Line | embryonic stem cell |
| 45 | chr1:228266600-228267200 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 46 | chr1:228266600-228267600 | Genic enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 47 | chr1:228266600-228267600 | Weak transcription | GM12878-XiMat | blood |
| 48 | chr1:228266600-228267800 | Bivalent Enhancer | iPS DF 19.11 Cell Line | embryonic stem cell |
| 49 | chr1:228266800-228267000 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 50 | chr1:228266800-228267000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
