The 2.0 version of rSNPBase

Variant report

Variant rs74140919
Chromosome Location chr1:228273574-228273575
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228271000-228273600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
2 chr1:228271000-228273600 Transcr. at gene 5' and 3' Dnd41 blood
3 chr1:228271000-228273800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
4 chr1:228271000-228274000 Flanking Active TSS Stomach Smooth Muscle stomach
5 chr1:228271200-228273600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:228271200-228274000 Flanking Active TSS Adipose Nuclei Adipose
7 chr1:228271400-228273600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:228271400-228273600 Flanking Active TSS Duodenum Mucosa Duodenum
9 chr1:228271400-228273600 Transcr. at gene 5' and 3' K562 blood
10 chr1:228271400-228273600 Transcr. at gene 5' and 3' NHEK skin
11 chr1:228271400-228273800 Flanking Active TSS Left Ventricle heart
12 chr1:228271400-228274000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
13 chr1:228271400-228274200 Transcr. at gene 5' and 3' GM12878-XiMat blood
14 chr1:228271600-228273600 Flanking Active TSS Rectal Smooth Muscle rectum
15 chr1:228271600-228273800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
16 chr1:228271600-228273800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
17 chr1:228271600-228273800 Flanking Active TSS Brain Anterior Caudate brain
18 chr1:228271600-228273800 Flanking Active TSS Colonic Mucosa Colon
19 chr1:228271600-228274000 Flanking Active TSS Colon Smooth Muscle Colon
20 chr1:228271600-228274000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
21 chr1:228271600-228278600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
22 chr1:228271800-228274000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:228271800-228274000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:228271800-228274000 Flanking Active TSS Muscle Satellite Cultured Cells --
25 chr1:228272000-228273600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:228272000-228273600 Transcr. at gene 5' and 3' Hela-S3 cervix
27 chr1:228272000-228273800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr1:228272000-228273800 Enhancers Placenta Amnion Placenta Amnion
29 chr1:228272000-228274000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
30 chr1:228272000-228274000 Flanking Active TSS HUVEC blood vessel
31 chr1:228272000-228275200 Enhancers Primary mononuclear cells fromperipheralblood Blood
32 chr1:228272000-228275400 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr1:228272000-228275800 Enhancers Spleen Spleen
34 chr1:228272200-228274000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
35 chr1:228272200-228274000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
36 chr1:228272200-228274000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
37 chr1:228272200-228274000 Flanking Active TSS Osteobl bone
38 chr1:228272200-228275400 Enhancers Primary B cells from peripheral blood blood
39 chr1:228272400-228273600 Enhancers H1 Cell Line embryonic stem cell
40 chr1:228272400-228273600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr1:228272400-228273800 Genic enhancers Cortex derived primary cultured neurospheres brain
42 chr1:228272400-228274000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:228272400-228274000 Flanking Active TSS NHDF-Ad bronchial
44 chr1:228272400-228274600 Enhancers Brain Substantia Nigra brain
45 chr1:228272400-228279400 Genic enhancers Fetal Muscle Leg muscle
46 chr1:228272400-228280000 Genic enhancers Fetal Thymus thymus
47 chr1:228272400-228284400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:228272600-228273600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:228272600-228273800 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr1:228272600-228273800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015