Variant report
| Variant | rs74140953 |
|---|---|
| Chromosome Location | chr1:228277065-228277066 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:228271600-228278600 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 2 | chr1:228272400-228279400 | Genic enhancers | Fetal Muscle Leg | muscle |
| 3 | chr1:228272400-228280000 | Genic enhancers | Fetal Thymus | thymus |
| 4 | chr1:228272400-228284400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr1:228272600-228278400 | Enhancers | Small Intestine | intestine |
| 6 | chr1:228272600-228280200 | Enhancers | Fetal Heart | heart |
| 7 | chr1:228272800-228278600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr1:228272800-228278600 | Genic enhancers | Fetal Stomach | stomach |
| 9 | chr1:228273000-228277400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 10 | chr1:228273000-228279200 | Genic enhancers | Fetal Intestine Small | intestine |
| 11 | chr1:228273000-228284200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 12 | chr1:228273400-228277600 | Enhancers | Brain Cingulate Gyrus | brain |
| 13 | chr1:228273400-228278200 | Genic enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 14 | chr1:228273400-228279000 | Genic enhancers | HepG2 | liver |
| 15 | chr1:228273400-228280200 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 16 | chr1:228273400-228285200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 17 | chr1:228273600-228277200 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 18 | chr1:228273600-228277400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr1:228273600-228277800 | Genic enhancers | Dnd41 | blood |
| 20 | chr1:228273600-228278200 | Weak transcription | Fetal Brain Male | brain |
| 21 | chr1:228273600-228278200 | Genic enhancers | K562 | blood |
| 22 | chr1:228273600-228281800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 23 | chr1:228273800-228279200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 24 | chr1:228274000-228279200 | Enhancers | Colon Smooth Muscle | Colon |
| 25 | chr1:228274000-228280600 | Enhancers | Psoas Muscle | Psoas |
| 26 | chr1:228274200-228281200 | Genic enhancers | Liver | Liver |
| 27 | chr1:228274600-228277200 | Transcr. at gene 5' and 3' | Primary hematopoietic stem cells short term culture | blood |
| 28 | chr1:228274600-228278200 | Genic enhancers | A549 | lung |
| 29 | chr1:228274600-228278800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 30 | chr1:228274600-228278800 | Enhancers | Placenta Amnion | Placenta Amnion |
| 31 | chr1:228274600-228280600 | Genic enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 32 | chr1:228274800-228277400 | Genic enhancers | Rectal Mucosa Donor 29 | rectum |
| 33 | chr1:228274800-228278800 | Transcr. at gene 5' and 3' | GM12878-XiMat | blood |
| 34 | chr1:228274800-228279200 | Genic enhancers | Fetal Intestine Large | intestine |
| 35 | chr1:228275000-228277200 | Genic enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 36 | chr1:228275200-228280800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 37 | chr1:228275200-228282000 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr1:228275400-228277200 | Genic enhancers | ES-I3 Cell Line | embryonic stem cell |
| 39 | chr1:228275400-228277600 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr1:228275400-228278200 | Genic enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 41 | chr1:228275400-228279200 | Genic enhancers | Fetal Muscle Trunk | muscle |
| 42 | chr1:228275400-228281200 | Genic enhancers | Gastric | stomach |
| 43 | chr1:228275400-228281400 | Genic enhancers | Primary B cells from peripheral blood | blood |
| 44 | chr1:228275600-228277600 | Genic enhancers | Rectal Mucosa Donor 31 | rectum |
| 45 | chr1:228275600-228277800 | Transcr. at gene 5' and 3' | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr1:228275600-228277800 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 47 | chr1:228275600-228278200 | Transcr. at gene 5' and 3' | Primary T helper cells PMA-I stimulated | -- |
| 48 | chr1:228275600-228279200 | Genic enhancers | Thymus | Thymus |
| 49 | chr1:228275600-228279400 | Genic enhancers | Sigmoid Colon | Sigmoid Colon |
| 50 | chr1:228275600-228280200 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
