The 2.0 version of rSNPBase

Variant report

Variant rs74140963
Chromosome Location chr1:228293980-228293981
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228291400-228296400 Weak transcription Aorta Aorta
2 chr1:228291600-228296000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:228291800-228294000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:228291800-228294000 Weak transcription Muscle Satellite Cultured Cells --
5 chr1:228291800-228294000 Weak transcription HMEC breast
6 chr1:228291800-228295600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:228291800-228295600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:228291800-228296200 Weak transcription NH-A brain
9 chr1:228291800-228296400 Weak transcription Small Intestine intestine
10 chr1:228292000-228294200 Weak transcription HSMM muscle
11 chr1:228292000-228295400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:228292000-228295800 Weak transcription Fetal Brain Male brain
13 chr1:228292000-228296000 Weak transcription Fetal Kidney kidney
14 chr1:228292000-228296000 Weak transcription HUVEC blood vessel
15 chr1:228292000-228296200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:228292000-228296200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:228292200-228294200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:228292200-228295400 Weak transcription Hela-S3 cervix
19 chr1:228292200-228295600 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:228292200-228295600 Weak transcription NHEK skin
21 chr1:228292200-228295800 Weak transcription Primary hematopoietic stem cells blood
22 chr1:228292200-228295800 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:228292200-228296000 Weak transcription Rectal Smooth Muscle rectum
24 chr1:228292200-228296200 Weak transcription Psoas Muscle Psoas
25 chr1:228292400-228294000 Weak transcription HepG2 liver
26 chr1:228292400-228295600 Strong transcription Fetal Stomach stomach
27 chr1:228292400-228295800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:228292600-228294200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:228292600-228294600 Strong transcription A549 lung
30 chr1:228292600-228295400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:228292600-228295600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:228292600-228295600 Strong transcription Fetal Intestine Small intestine
33 chr1:228292600-228295800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:228292600-228296200 Weak transcription Right Atrium heart
35 chr1:228292800-228294000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:228292800-228294000 Weak transcription Colon Smooth Muscle Colon
37 chr1:228292800-228294800 Strong transcription GM12878-XiMat blood
38 chr1:228292800-228295400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:228292800-228295400 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr1:228292800-228295400 Strong transcription Fetal Brain Female brain
41 chr1:228292800-228295400 Strong transcription Placenta Placenta
42 chr1:228292800-228295600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:228292800-228296000 Weak transcription Fetal Heart heart
44 chr1:228292800-228296200 Weak transcription NHDF-Ad bronchial
45 chr1:228293000-228294400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:228293000-228294600 Strong transcription Ovary ovary
47 chr1:228293000-228295000 Strong transcription Brain Germinal Matrix brain
48 chr1:228293000-228295200 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr1:228293000-228295200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:228293000-228295200 Strong transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015