Variant report

Variant	rs56190114
Chromosome Location	chr8:91128367-91128368
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91124236..91126354-chr8:91127708..91130462,3	K562	blood:
2	chr8:91126270..91128899-chr8:91135979..91138410,2	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs13312836	1.00[AMR][1000 genomes]
rs13312854	1.00[AMR][1000 genomes]
rs13312860	1.00[AMR][1000 genomes]
rs13312862	1.00[AMR][1000 genomes]
rs13312863	1.00[AMR][1000 genomes]
rs13312864	1.00[AMR][1000 genomes]
rs13312874	1.00[AMR][1000 genomes]
rs13312891	1.00[AMR][1000 genomes]
rs13312922	1.00[AMR][1000 genomes]
rs13312931	1.00[AMR][1000 genomes]
rs2308961	1.00[AMR][1000 genomes]
rs55663774	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55683922	1.00[AMR][1000 genomes]
rs55978729	1.00[AMR][1000 genomes]
rs58089706	1.00[AMR][1000 genomes]
rs59528945	0.83[AFR][1000 genomes]
rs59899647	1.00[AMR][1000 genomes]
rs61365155	1.00[AMR][1000 genomes]
rs6987476	1.00[AMR][1000 genomes]
rs73694306	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694307	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694313	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694316	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73696843	1.00[AMR][1000 genomes]
rs73696845	1.00[AMR][1000 genomes]
rs73696848	1.00[AMR][1000 genomes]
rs73696850	1.00[AMR][1000 genomes]
rs73696851	1.00[AMR][1000 genomes]
rs73696853	1.00[AMR][1000 genomes]
rs73696854	1.00[AMR][1000 genomes]
rs73698022	0.83[AFR][1000 genomes]
rs769417	1.00[AMR][1000 genomes]
rs7823648	1.00[AMR][1000 genomes]
rs7823987	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	esv2757281	chr8:91090821-91235335	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	esv34347	chr8:91101339-91179126	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
5	nsv470225	chr8:91113616-91229254	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
6	nsv891184	chr8:91114698-91222654	Active TSS Genic enhancers Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91127200-91130200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr8:91127600-91128400	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr8:91127600-91128800	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr8:91128000-91128400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:91128000-91128600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr8:91128000-91128600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr8:91128200-91128800	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr8:91128200-91129000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr8:91128200-91129800	Enhancers	HUES6 Cell Line	embryonic stem cell

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