Variant report
| Variant | rs56254449 |
|---|---|
| Chromosome Location | chr3:51311835-51311836 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:51252000-51312600 | Weak transcription | HSMMtube | muscle |
| 2 | chr3:51253400-51312200 | Weak transcription | Brain Substantia Nigra | brain |
| 3 | chr3:51288200-51319200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr3:51296400-51318800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 5 | chr3:51297000-51317400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 6 | chr3:51298000-51314400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 7 | chr3:51298000-51320800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 8 | chr3:51298400-51319000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 9 | chr3:51299600-51320800 | Weak transcription | Brain Germinal Matrix | brain |
| 10 | chr3:51303600-51312200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 11 | chr3:51304400-51317400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 12 | chr3:51305000-51318800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 13 | chr3:51308200-51323000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 14 | chr3:51308800-51314800 | Weak transcription | Fetal Brain Female | brain |
| 15 | chr3:51309000-51313200 | Enhancers | Primary T cells from cord blood | blood |
| 16 | chr3:51309200-51312400 | Weak transcription | Brain Hippocampus Middle | brain |
| 17 | chr3:51309600-51312000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 18 | chr3:51309600-51312200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 19 | chr3:51309800-51312000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 20 | chr3:51309800-51312200 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 21 | chr3:51310400-51312200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 22 | chr3:51311000-51312000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 23 | chr3:51311000-51312600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr3:51311200-51312400 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 25 | chr3:51311200-51319200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr3:51311600-51312800 | Enhancers | Primary T cells fromperipheralblood | blood |
| 27 | chr3:51311600-51313000 | Genic enhancers | Brain Angular Gyrus | brain |
| 28 | chr3:51311800-51312200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 29 | chr3:51311800-51316800 | Weak transcription | Brain Anterior Caudate | brain |
