The 2.0 version of rSNPBase

Variant report

Variant rs56265999
Chromosome Location chr1:94683398-94683399
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94640000-94684800 Weak transcription Spleen Spleen
2 chr1:94642400-94684600 Weak transcription Fetal Stomach stomach
3 chr1:94644800-94684400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:94645000-94687600 Weak transcription Pancreas Pancrea
5 chr1:94649400-94684000 Weak transcription Right Ventricle heart
6 chr1:94668400-94687000 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr1:94668600-94684400 Weak transcription Psoas Muscle Psoas
8 chr1:94668800-94699000 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr1:94669400-94687600 Weak transcription Gastric stomach
10 chr1:94670000-94684000 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr1:94670400-94684400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:94670600-94684400 Weak transcription Fetal Kidney kidney
13 chr1:94670800-94686400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:94670800-94686400 Weak transcription Placenta Placenta
15 chr1:94673800-94684400 Weak transcription Lung lung
16 chr1:94673800-94698600 Weak transcription Fetal Muscle Trunk muscle
17 chr1:94673800-94701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:94674000-94697000 Weak transcription HSMMtube muscle
19 chr1:94675400-94684400 Weak transcription Adipose Nuclei Adipose
20 chr1:94676200-94687600 Weak transcription A549 lung
21 chr1:94676400-94691600 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:94676800-94684000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:94676800-94684600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:94678800-94683400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:94679200-94685000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:94680400-94684000 Weak transcription HepG2 liver
27 chr1:94680800-94688200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:94681200-94689000 Genic enhancers HUVEC blood vessel
29 chr1:94681800-94684400 Weak transcription Fetal Heart heart
30 chr1:94681800-94685800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:94682000-94683600 Weak transcription Osteobl bone
32 chr1:94682000-94684000 Weak transcription HSMM muscle
33 chr1:94682000-94684200 Weak transcription NHEK skin
34 chr1:94682000-94684400 Weak transcription NHLF lung
35 chr1:94682000-94684600 Weak transcription Liver Liver
36 chr1:94682200-94683800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:94682200-94684000 Weak transcription NH-A brain
38 chr1:94682200-94684400 Weak transcription NHDF-Ad bronchial
39 chr1:94682200-94684800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:94682600-94683600 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr1:94682800-94683400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:94682800-94685600 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr1:94683000-94683400 Strong transcription Muscle Satellite Cultured Cells --
44 chr1:94683000-94683400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:94683000-94683400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:94683000-94683400 Enhancers Left Ventricle heart
47 chr1:94683000-94683800 Weak transcription HMEC breast
48 chr1:94683000-94684400 Strong transcription Fetal Muscle Leg muscle
49 chr1:94683000-94690000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015