Variant report
| Variant | rs56333717 |
|---|---|
| Chromosome Location | chr1:180403621-180403622 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:180349400-180407000 | Weak transcription | Esophagus | oesophagus |
| 2 | chr1:180356800-180406200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr1:180356800-180407000 | Weak transcription | Aorta | Aorta |
| 4 | chr1:180361400-180407600 | Weak transcription | HepG2 | liver |
| 5 | chr1:180365200-180420600 | Weak transcription | A549 | lung |
| 6 | chr1:180374600-180404000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 7 | chr1:180376200-180407400 | Weak transcription | NHLF | lung |
| 8 | chr1:180379000-180430800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 9 | chr1:180379800-180406000 | Weak transcription | Left Ventricle | heart |
| 10 | chr1:180380400-180408000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 11 | chr1:180381200-180406400 | Weak transcription | Fetal Stomach | stomach |
| 12 | chr1:180382400-180410800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 13 | chr1:180382600-180406000 | Weak transcription | Dnd41 | blood |
| 14 | chr1:180382600-180406400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 15 | chr1:180382600-180406600 | Weak transcription | Hela-S3 | cervix |
| 16 | chr1:180389600-180406000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr1:180389800-180410400 | Weak transcription | Fetal Intestine Large | intestine |
| 18 | chr1:180391000-180409000 | Weak transcription | Primary T cells from cord blood | blood |
| 19 | chr1:180391200-180410200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 20 | chr1:180391400-180404800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr1:180391600-180403800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 22 | chr1:180391800-180404000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 23 | chr1:180391800-180408000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 24 | chr1:180392200-180405400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 25 | chr1:180392600-180446200 | Weak transcription | K562 | blood |
| 26 | chr1:180394400-180407000 | Weak transcription | Psoas Muscle | Psoas |
| 27 | chr1:180394400-180407800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 28 | chr1:180394600-180405000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 29 | chr1:180394600-180407000 | Weak transcription | Brain Germinal Matrix | brain |
| 30 | chr1:180394800-180420200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 31 | chr1:180396000-180404800 | Weak transcription | Fetal Lung | lung |
| 32 | chr1:180398000-180408000 | Weak transcription | Fetal Heart | heart |
| 33 | chr1:180398800-180405600 | Weak transcription | Primary B cells from cord blood | blood |
| 34 | chr1:180399000-180420800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 35 | chr1:180399400-180407000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 36 | chr1:180399600-180420400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 37 | chr1:180399600-180420400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 38 | chr1:180401400-180413800 | Weak transcription | Small Intestine | intestine |
| 39 | chr1:180401400-180420200 | Weak transcription | HSMM | muscle |
| 40 | chr1:180401400-180430400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 41 | chr1:180401800-180408800 | Weak transcription | Fetal Kidney | kidney |
| 42 | chr1:180401800-180410200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr1:180401800-180420800 | Weak transcription | NHDF-Ad | bronchial |
| 44 | chr1:180402000-180405400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 45 | chr1:180402000-180406000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 46 | chr1:180402200-180403800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 47 | chr1:180402400-180403800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 48 | chr1:180402400-180404000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 49 | chr1:180402400-180411400 | Weak transcription | Spleen | Spleen |
| 50 | chr1:180402600-180404000 | Enhancers | H1 Cell Line | embryonic stem cell |
