The 2.0 version of rSNPBase

Variant report

Variant rs66913400
Chromosome Location chr1:180407736-180407737
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180365200-180420600 Weak transcription A549 lung
2 chr1:180379000-180430800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:180380400-180408000 Weak transcription Primary T cells fromperipheralblood blood
4 chr1:180382400-180410800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:180389800-180410400 Weak transcription Fetal Intestine Large intestine
6 chr1:180391000-180409000 Weak transcription Primary T cells from cord blood blood
7 chr1:180391200-180410200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:180391800-180408000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:180392600-180446200 Weak transcription K562 blood
10 chr1:180394400-180407800 Weak transcription Primary B cells from peripheral blood blood
11 chr1:180394800-180420200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:180398000-180408000 Weak transcription Fetal Heart heart
13 chr1:180399000-180420800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:180399600-180420400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:180399600-180420400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:180401400-180413800 Weak transcription Small Intestine intestine
17 chr1:180401400-180420200 Weak transcription HSMM muscle
18 chr1:180401400-180430400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:180401800-180408800 Weak transcription Fetal Kidney kidney
20 chr1:180401800-180410200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:180401800-180420800 Weak transcription NHDF-Ad bronchial
22 chr1:180402400-180411400 Weak transcription Spleen Spleen
23 chr1:180402800-180409000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:180403200-180408200 Weak transcription Placenta Placenta
25 chr1:180403200-180408800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:180403400-180408800 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:180403400-180410200 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:180403400-180426200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:180403400-180431200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr1:180403400-180448000 Weak transcription HMEC breast
31 chr1:180404000-180421800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr1:180404200-180431800 Weak transcription NHEK skin
33 chr1:180404400-180469000 Weak transcription Pancreas Pancrea
34 chr1:180405600-180407800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:180406200-180420200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:180406600-180409600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:180406600-180420600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:180406800-180408200 Weak transcription Primary B cells from cord blood blood
39 chr1:180406800-180410000 Weak transcription Dnd41 blood
40 chr1:180407200-180408200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:180407200-180408400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:180407400-180408600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:180407400-180408800 Weak transcription GM12878-XiMat blood
44 chr1:180407600-180411200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015