The 2.0 version of rSNPBase

Variant report

Variant rs67830766
Chromosome Location chr1:180406727-180406728
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180349400-180407000 Weak transcription Esophagus oesophagus
2 chr1:180356800-180407000 Weak transcription Aorta Aorta
3 chr1:180361400-180407600 Weak transcription HepG2 liver
4 chr1:180365200-180420600 Weak transcription A549 lung
5 chr1:180376200-180407400 Weak transcription NHLF lung
6 chr1:180379000-180430800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:180380400-180408000 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:180382400-180410800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:180389800-180410400 Weak transcription Fetal Intestine Large intestine
10 chr1:180391000-180409000 Weak transcription Primary T cells from cord blood blood
11 chr1:180391200-180410200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:180391800-180408000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:180392600-180446200 Weak transcription K562 blood
14 chr1:180394400-180407000 Weak transcription Psoas Muscle Psoas
15 chr1:180394400-180407800 Weak transcription Primary B cells from peripheral blood blood
16 chr1:180394600-180407000 Weak transcription Brain Germinal Matrix brain
17 chr1:180394800-180420200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:180398000-180408000 Weak transcription Fetal Heart heart
19 chr1:180399000-180420800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:180399400-180407000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:180399600-180420400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:180399600-180420400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:180401400-180413800 Weak transcription Small Intestine intestine
24 chr1:180401400-180420200 Weak transcription HSMM muscle
25 chr1:180401400-180430400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:180401800-180408800 Weak transcription Fetal Kidney kidney
27 chr1:180401800-180410200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:180401800-180420800 Weak transcription NHDF-Ad bronchial
29 chr1:180402400-180411400 Weak transcription Spleen Spleen
30 chr1:180402800-180409000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:180403200-180407000 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:180403200-180408200 Weak transcription Placenta Placenta
33 chr1:180403200-180408800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr1:180403400-180407000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:180403400-180408800 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr1:180403400-180410200 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:180403400-180426200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:180403400-180431200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:180403400-180448000 Weak transcription HMEC breast
40 chr1:180403800-180406800 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr1:180403800-180407400 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr1:180404000-180421800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr1:180404200-180407600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr1:180404200-180431800 Weak transcription NHEK skin
45 chr1:180404400-180469000 Weak transcription Pancreas Pancrea
46 chr1:180405000-180407000 Weak transcription Fetal Intestine Small intestine
47 chr1:180405000-180407200 Weak transcription Fetal Muscle Leg muscle
48 chr1:180405200-180407400 Strong transcription GM12878-XiMat blood
49 chr1:180405600-180406800 Strong transcription Primary B cells from cord blood blood
50 chr1:180405600-180407000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015