The 2.0 version of rSNPBase

Variant report

Variant rs72714896
Chromosome Location chr1:180402349-180402350
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180349400-180407000 Weak transcription Esophagus oesophagus
2 chr1:180355200-180402600 Weak transcription HMEC breast
3 chr1:180356800-180406200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:180356800-180407000 Weak transcription Aorta Aorta
5 chr1:180361400-180407600 Weak transcription HepG2 liver
6 chr1:180365200-180420600 Weak transcription A549 lung
7 chr1:180365400-180402600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:180374600-180404000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr1:180376200-180407400 Weak transcription NHLF lung
10 chr1:180379000-180430800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:180379800-180406000 Weak transcription Left Ventricle heart
12 chr1:180380400-180408000 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:180381200-180402800 Weak transcription NHEK skin
14 chr1:180381200-180406400 Weak transcription Fetal Stomach stomach
15 chr1:180382400-180410800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:180382600-180402800 Weak transcription Placenta Placenta
17 chr1:180382600-180406000 Weak transcription Dnd41 blood
18 chr1:180382600-180406400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:180382600-180406600 Weak transcription Hela-S3 cervix
20 chr1:180389600-180406000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:180389800-180410400 Weak transcription Fetal Intestine Large intestine
22 chr1:180391000-180409000 Weak transcription Primary T cells from cord blood blood
23 chr1:180391200-180410200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:180391400-180404800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:180391600-180403800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:180391800-180402800 Weak transcription Fetal Intestine Small intestine
27 chr1:180391800-180404000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:180391800-180408000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:180392000-180403000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:180392200-180405400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:180392600-180446200 Weak transcription K562 blood
32 chr1:180394400-180407000 Weak transcription Psoas Muscle Psoas
33 chr1:180394400-180407800 Weak transcription Primary B cells from peripheral blood blood
34 chr1:180394600-180405000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:180394600-180407000 Weak transcription Brain Germinal Matrix brain
36 chr1:180394800-180403000 Weak transcription H9 Cell Line embryonic stem cell
37 chr1:180394800-180420200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:180395800-180402800 Weak transcription Fetal Brain Female brain
39 chr1:180396000-180404800 Weak transcription Fetal Lung lung
40 chr1:180396200-180402600 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:180398000-180408000 Weak transcription Fetal Heart heart
42 chr1:180398600-180402600 Weak transcription Primary hematopoietic stem cells blood
43 chr1:180398800-180405600 Weak transcription Primary B cells from cord blood blood
44 chr1:180399000-180420800 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:180399400-180407000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:180399600-180402600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:180399600-180420400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:180399600-180420400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:180401200-180402600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:180401400-180402400 Enhancers Osteobl bone

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Last update: Aug 31, 2015