The 2.0 version of rSNPBase

Variant report

Variant rs56911077
Chromosome Location chr13:79928261-79928262
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79886600-79950200 Weak transcription Fetal Brain Male brain
2 chr13:79887200-79946600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr13:79888000-79942800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr13:79888200-79947000 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr13:79888400-79947000 Strong transcription HUES64 Cell Line embryonic stem cell
6 chr13:79891600-79946800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr13:79891600-79947000 Strong transcription Primary monocytes fromperipheralblood blood
8 chr13:79891600-79947000 Strong transcription Dnd41 blood
9 chr13:79891800-79929200 Strong transcription HUES48 Cell Line embryonic stem cell
10 chr13:79891800-79935800 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr13:79893200-79957800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr13:79894200-79940200 Weak transcription Small Intestine intestine
13 chr13:79894400-79950200 Weak transcription Stomach Mucosa stomach
14 chr13:79898200-79939200 Weak transcription Fetal Stomach stomach
15 chr13:79898600-79941200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr13:79899000-79946400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr13:79900200-79933200 Weak transcription Psoas Muscle Psoas
18 chr13:79901400-79939200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr13:79904000-79928600 Weak transcription Right Ventricle heart
20 chr13:79905200-79928600 Weak transcription Brain Cingulate Gyrus brain
21 chr13:79906200-79939400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr13:79907200-79934200 Strong transcription Liver Liver
23 chr13:79909600-79939600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr13:79910000-79928600 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr13:79911600-79938600 Weak transcription H9 Cell Line embryonic stem cell
26 chr13:79911600-79939200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr13:79911600-79939200 Weak transcription Gastric stomach
28 chr13:79911600-79944000 Weak transcription Esophagus oesophagus
29 chr13:79911800-79939200 Weak transcription Spleen Spleen
30 chr13:79912400-79928600 Weak transcription Lung lung
31 chr13:79912400-79930000 Weak transcription Fetal Intestine Small intestine
32 chr13:79912400-79939200 Weak transcription Aorta Aorta
33 chr13:79913400-79928400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr13:79913400-79936400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr13:79913600-79928600 Weak transcription Colon Smooth Muscle Colon
36 chr13:79916600-79928600 Weak transcription Fetal Heart heart
37 chr13:79918800-79928600 Weak transcription Brain Germinal Matrix brain
38 chr13:79919400-79928400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr13:79920400-79928600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr13:79920800-79939200 Weak transcription Pancreas Pancrea
41 chr13:79921000-79928400 Weak transcription Fetal Muscle Trunk muscle
42 chr13:79921200-79947000 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr13:79921600-79930000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr13:79921600-79946800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr13:79922400-79947000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr13:79922600-79930400 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr13:79922800-79929600 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr13:79922800-79946600 Strong transcription Primary T cells fromperipheralblood blood
49 chr13:79923000-79950600 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr13:79923200-79946800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015